RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 CCL20P78556 96 aa5.19□□□□□ -1.58
PRKDC-201ENST00000314191 HERPUD1Q15011 391 aa5.19□□□□□ -1.58
PRKDC-201ENST00000314191 MANBALQ9NQG1 85 aa5.19□□□□□ -1.58
PRKDC-201ENST00000314191 C17orf100A8MU93 164 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 GATCO43716 136 aaKnown RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PCGF1Q9BSM1 259 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 WDR61Q9GZS3 305 aaKnown RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 KIAA1324LA8MWY0 1029 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 G3V3Q6 166 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SPP1P10451 314 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 OR1L8Q8NGR8 309 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SLC25A15Q9Y619 301 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF474Q6S9Z5 364 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RAMP3O60896 148 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 HCP5Q6MZN7 132 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RAXQ9Y2V3 346 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 IGKV1-6A0A0C4DH72 117 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 DBX1A6NMT0 343 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RPL11P62913 178 aaKnown RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 C10orf113Q5VZT2 155 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 ETFRF1Q6IPR1 90 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 TCTEX1D1Q8N7M0 179 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF439Q8NDP4 499 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PHOX2AO14813 284 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 NUBP1P53384 320 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 FAM90A1Q86YD7 464 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 C10orf142B7Z368 130 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 K7EQM0 130 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 NDUFB4O95168 129 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PLAUP00749 431 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 CTDSP1Q9GZU7 261 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PPIAL4CA0A0B4J2A2 164 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SRRM5B3KS81 715 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 CDK2AP1O14519 115 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 WISP2O76076 250 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 IGHV1-46P01743 117 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PPIAL4GP0DN37 164 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SPACA3Q8IXA5 215 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RNF115Q9Y4L5 304 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 MLNRO43193 412 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SMUG1Q53HV7 270 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 J3QR89 54 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 APOBEC3AP31941 199 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 MC5RP33032 325 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 GNG4P50150 75 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 Q6ZS92 163 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 EIF4E3Q8N5X7 224 aaKnown RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 SPRY4Q9C004 299 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 ASCL3Q9NQ33 180 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 EP300Q09472 2414 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RND2P52198 227 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 FAM3BP58499 235 aaPredicted RBP5.18□□□□□ -1.58
PRKDC-201ENST00000314191 KLRB1Q12918 225 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 RNF212Q495C1 297 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 PCSK4Q6UW60 755 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 OR1B1Q8NGR6 318 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 COQ2Q96H96 371 aa5.18□□□□□ -1.58
PRKDC-201ENST00000314191 CA2P00918 260 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 HSPB1P04792 205 aaKnown RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MORN2Q502X0 79 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 VSIRQ9H7M9 311 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 PCNX1Q96RV3 2341 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MBD3L4A6NDZ8 208 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MBD3L3A6NE82 208 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MBD3L5A6NJ08 208 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 S100A8P05109 93 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 SRSF4Q08170 494 aaKnown RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF343Q6P1L6 599 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 MBD3L2Q8NHZ7 208 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 NABP2Q9BQ15 211 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 HABP2Q14520 560 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 DNASE2O00115 360 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 CSN1S1P47710 185 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 DPPA3Q6W0C5 159 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 OR2T6Q8NHC8 308 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 TMEM167BQ9NRX6 74 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 KBTBD11-OT1A0A1B0GTJ5 212 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 CEACAM18A8MTB9 384 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 AP4M1O00189 453 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF146Q15072 292 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 FAM53AQ6NSI3 398 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 GLRX5Q86SX6 157 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 HIST1H2BAQ96A08 127 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 SMDT1Q9H4I9 107 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 TFF3Q07654 80 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 WASHC3Q9Y3C0 194 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 CD55P08174 381 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 PNKDQ8N490 385 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 LRTM2Q8N967 370 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 NDUFA2O43678 99 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 REG1AP05451 166 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 SRP19P09132 144 aaKnown RBP5.17□□□□□ -1.58
PRKDC-201ENST00000314191 PAX5Q02548 391 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 Q6ZR03 302 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 SSX8Q7RTT4 187 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 OR2T10Q8NGZ9 312 aa5.17□□□□□ -1.58
PRKDC-201ENST00000314191 RNF2Q99496 336 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms