RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 LINC00473A8K010 186 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 A8MXE2 369 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
MKS1-201ENST00000313863 LAMTOR5O43504 91 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 CD46P15529 392 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 TPPP2P59282 170 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
MKS1-201ENST00000313863 MZT1Q08AG7 82 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 CMTM2Q8TAZ6 248 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 HEYLQ9NQ87 328 aaPredicted RBP11.54□□□□□ -0.56
MKS1-201ENST00000313863 PSG11Q9UQ72 335 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 LY96Q9Y6Y9 160 aa11.54□□□□□ -0.56
MKS1-201ENST00000313863 CRYABP02511 175 aaKnown RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 CELA3BP08861 270 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 SELENOTP62341 195 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 ZDHHC11Q9H8X9 412 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 TRGV5A0A0B4J1U4 118 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 GALR2O43603 387 aaPredicted RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 C1QTNF9P0C862 333 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 TIMP3P35625 211 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 RANP62826 216 aaKnown RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 MYPOPQ86VE0 399 aaPredicted RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 MDS2Q8NDY4 140 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 KLF14Q8TD94 323 aaPredicted RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
MKS1-201ENST00000313863 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 R4GN57 208 aa11.53□□□□□ -0.56
MKS1-201ENST00000313863 ZNF705FA8MVS1 300 aaPredicted RBP11.52□□□□□ -0.57
MKS1-201ENST00000313863 EREGO14944 169 aa11.52□□□□□ -0.57
MKS1-201ENST00000313863 ZNF705DP0CH99 300 aaPredicted RBP11.52□□□□□ -0.57
MKS1-201ENST00000313863 ZNF705BP0CI00 300 aaPredicted RBP11.52□□□□□ -0.57
MKS1-201ENST00000313863 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
MKS1-201ENST00000313863 RAB31Q13636 194 aa11.52□□□□□ -0.57
MKS1-201ENST00000313863 ALKBH6Q3KRA9 238 aa11.52□□□□□ -0.57
MKS1-201ENST00000313863 TEX38Q6PEX7 206 aa11.52□□□□□ -0.57
MKS1-201ENST00000313863 TREML4Q6UXN2 200 aa11.52□□□□□ -0.57
MKS1-201ENST00000313863 TRBV9A0A0B4J1U6 114 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 C9orf172C9J069 976 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 WNT9BO14905 357 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 OR9G9P0C7N8 305 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 ZNF883P0CG24 379 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 ESDP10768 282 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 GCH1P30793 250 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 HOXC12P31275 282 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 RHOBP62745 196 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 ZNF90Q03938 601 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 FOXF2Q12947 444 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 C11orf53Q8IXP5 236 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 FER1L6-AS2Q96M78 137 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 DERL1Q9BUN8 251 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 GGTLC1Q9BX51 225 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 IL36BQ9NZH7 164 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 POLR3KQ9Y2Y1 108 aaPredicted RBP11.51□□□□□ -0.57
MKS1-201ENST00000313863 ARL2-SNX15V9GYD0 113 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 C9JCJ5 164 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 FCGR3BO75015 233 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 EGR1P18146 543 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 ADMP35318 185 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 SSTR5P35346 364 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 GCSAMLQ5JQS6 135 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 WDR82Q6UXN9 313 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 OR13A1Q8NGR1 328 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 PPP1R35Q8TAP8 253 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 PATZ1Q9HBE1 687 aaKnown RBP11.51□□□□□ -0.57
MKS1-201ENST00000313863 NPVFQ9HCQ7 196 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
MKS1-201ENST00000313863 TRGV8A0A0C4DH27 118 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 IGHV3-64DA0A0J9YX35 117 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 TIMM8AO60220 97 aaPredicted RBP11.5□□□□□ -0.57
MKS1-201ENST00000313863 DEFA4P12838 97 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 IGHV1-2P23083 117 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 MPV17P39210 176 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 PLA2G5P39877 138 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 VDAC2P45880 294 aaPredicted RBP11.5□□□□□ -0.57
MKS1-201ENST00000313863 TRIP6Q15654 476 aaKnown RBP11.5□□□□□ -0.57
MKS1-201ENST00000313863 ZNF826PQ6ZT77 177 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 VASH2Q86V25 355 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 TMEM256Q8N2U0 113 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 CORO2AQ92828 525 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 C11orf52Q96A22 123 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 SDSLQ96GA7 329 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 MGST2Q99735 147 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 SNHG12Q9BXW3 62 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
MKS1-201ENST00000313863 FAM186AA6NE01 2351 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 CFAP54Q96N23 3096 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 C15orf65H3BRN8 121 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 CRISP2P16562 243 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 GCHFRP30047 84 aa11.5□□□□□ -0.57
MKS1-201ENST00000313863 PRSS8Q16651 343 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms