RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ID3Q02535 119 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 SMCO1Q147U7 214 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 CLEC12BQ2HXU8 276 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 THOC7Q6I9Y2 204 aaKnown RBP5.64□□□□□ -1.51
PTCD2-201ENST00000308077 C1orf122Q6ZSJ8 110 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 VKORC1L1Q8N0U8 176 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 BEND2Q8NDZ0 799 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 OR4S2Q8NH73 311 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 R3HDM4Q96D70 268 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 MAGT1Q9H0U3 335 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 UNKLQ9H9P5 680 aaKnown RBP5.64□□□□□ -1.51
PTCD2-201ENST00000308077 LPAR2Q9HBW0 351 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 KPTNQ9Y664 436 aa5.64□□□□□ -1.51
PTCD2-201ENST00000308077 A0A096LNT2 108 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 PIGBOS1A0A0B4J2F0 54 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ODF3BA8MYP8 253 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 LY6LH3BQJ8 138 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ST8SIA3O43173 380 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 FOXH1O75593 365 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 OR9G9P0C7N8 305 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 PET100P0DJ07 73 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 PRRX1P54821 245 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 SSX9Q7RTT3 188 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 PDZD9Q8IXQ8 264 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 OR11H6Q8NGC7 330 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 OR5AN1Q8NGI8 311 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 OR13D1Q8NGV5 346 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TBX15Q96SF7 602 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 SLC35D1Q9NTN3 355 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TET2Q6N021 2002 aaPredicted RBP5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ACANP16112 2415 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 SRRM4A7MD48 611 aaKnown RBP5.63□□□□□ -1.51
PTCD2-201ENST00000308077 RNASEK-C17orf49H0YIS7 233 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 SSSCA1O60232 199 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TMEM50AO95807 157 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ARG1P05089 322 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 HKR1P10072 659 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 NQO2P16083 231 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 IL3RAP26951 378 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 S100A11P31949 105 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 DVL1P1P54792 670 aaPredicted RBP5.63□□□□□ -1.51
PTCD2-201ENST00000308077 DSCR9P59020 149 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ZNF345Q14585 488 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 DEFB113Q30KQ7 82 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TEX261Q6UWH6 196 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ACOT7LQ6ZUV0 252 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 H2BFWTQ7Z2G1 175 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TGIF2LXQ8IUE1 241 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 KCNRGQ8N5I3 272 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ZNF680Q8NEM1 530 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 OR8H1Q8NGG4 311 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 ARL6Q9H0F7 186 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 BEX4Q9NWD9 120 aaPredicted RBP5.63□□□□□ -1.51
PTCD2-201ENST00000308077 COA4Q9NYJ1 87 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 NSG2Q9Y328 171 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 U3KQ87 197 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TACC2O95359 2948 aa5.63□□□□□ -1.51
PTCD2-201ENST00000308077 TRAV3A0A0B4J244 114 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PRD5 423 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PRF3 423 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PRM7 423 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 E5RGE8 158 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 ATG12O94817 140 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 TOX4O94842 621 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 OR2F2O95006 317 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 RLN2P04090 185 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 HTR2BP41595 481 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 PAX9P55771 341 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 RELBQ01201 579 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 OR2F1Q13607 317 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 EXOSC2Q13868 293 aaKnown RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 RTL8BQ17RB0 113 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 LHFPL4Q7Z7J7 247 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 AQP10Q96PS8 301 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 PCGF1Q9BSM1 259 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 TMEM140Q9NV12 185 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 INSIG2Q9Y5U4 225 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 AKAP9Q99996 3911 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 IGHV3-72A0A0B4J1Y9 119 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 IGHV1-3A0A0C4DH29 117 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 A0A0D9SG52 128 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 A0A1W2PPI3 338 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 CHST1O43916 411 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 APOA2P02652 100 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 IL6RP08887 468 aaPredicted RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 SLC25A16P16260 332 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 PAX6P26367 422 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 OR2B8PP59922 312 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 PAX8Q06710 450 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 POU2AF1Q16633 256 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 TMEM177Q53S58 311 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 TPTE2P1Q5T6R2 138 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 DHRS7BQ6IAN0 325 aaPredicted RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 OR4A47Q6IF82 309 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 LRRC75A-AS1Q8N1F1 130 aa5.62□□□□□ -1.51
PTCD2-201ENST00000308077 INO80EQ8NBZ0 244 aaPredicted RBP5.62□□□□□ -1.51
PTCD2-201ENST00000308077 C17orf50Q8WW18 174 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms