RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TRIB1Q96RU8 372 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF891A8MT65 544 aaPredicted RBP12.27□□□□□ -0.45
PTPN9-201ENST00000306726 TNFRSF9Q07011 255 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 GGNQ86UU5 652 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 ODF3L1Q8IXM7 274 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 CMTM2Q8TAZ6 248 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 RND1Q92730 232 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.27□□□□□ -0.45
PTPN9-201ENST00000306726 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
PTPN9-201ENST00000306726 SCO2A0A1W2PP80 73 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 HBZP02008 142 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 ARL14EPLP0DKL9 152 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 RPL39P5Q59GN2 51 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 OR2Z1Q8NG97 314 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 ACY3Q96HD9 319 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 RTL8AQ9BWD3 113 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF391Q9UJN7 358 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 SNURFLB1AK76 121 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 TCF21O43680 179 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 PSPNO60542 156 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 AMTP48728 403 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 SSC4DQ8WTU2 575 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 IMMP1LQ96LU5 166 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 QTRT1Q9BXR0 403 aaKnown RBP12.26□□□□□ -0.45
PTPN9-201ENST00000306726 CISD1Q9NZ45 108 aaKnown RBP12.26□□□□□ -0.45
PTPN9-201ENST00000306726 ABI3Q9P2A4 366 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.26□□□□□ -0.455e-7■■■■■ 43.6
PTPN9-201ENST00000306726 IQCJQ1A5X6 159 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 OR8I2Q8N0Y5 310 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 TPPP3Q9BW30 176 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 RNF24Q9Y225 148 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 PTPRBP23467 1997 aa12.26□□□□□ -0.45
PTPN9-201ENST00000306726 ATRXP46100 2492 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 HRASP01112 189 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 IL3RAP26951 378 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 REG1BP48304 166 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 ERVK-16P61578 105 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 PNRC1Q12796 327 aaPredicted RBP12.25□□□□□ -0.45
PTPN9-201ENST00000306726 ABLIM2Q6H8Q1 611 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 TECRQ9NZ01 308 aaKnown RBP12.25□□□□□ -0.45
PTPN9-201ENST00000306726 SPRY3O43610 288 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 HAND1O96004 215 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 CRISP2P16562 243 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 LYPD6BQ8NI32 183 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 ST6GALNAC6Q969X2 333 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
PTPN9-201ENST00000306726 HSD17B10Q99714 261 aaKnown RBP12.25□□□□□ -0.45
PTPN9-201ENST00000306726 REPIN1Q9BWE0 567 aaKnown RBP12.25□□□□□ -0.45
PTPN9-201ENST00000306726 F2Z2F3 143 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 KBTBD11O94819 623 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 FOXO1Q12778 655 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 MRPL49Q13405 166 aaKnown RBP12.24□□□□□ -0.45
PTPN9-201ENST00000306726 TBC1D28Q2M2D7 210 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 SLC25A53Q5H9E4 307 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 SPATA31B1PQ5VZV4 182 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 LURAP1LQ8IV03 231 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 GTF3AQ92664 365 aaKnown RBP12.24□□□□□ -0.45
PTPN9-201ENST00000306726 M0R143 59 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 RRHO14718 337 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 CTSSP25774 331 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 TMEM251Q8N6I4 163 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 ZNRF1Q8ND25 227 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF439Q8NDP4 499 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 C12orf77C9JDV5 145 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 UCNP55089 124 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 TAS2R60P59551 318 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 ACOT6Q3I5F7 207 aaPredicted RBP12.24□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
PTPN9-201ENST00000306726 LRTM2Q8N967 370 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 R3HDM4Q96D70 268 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 VAMP8Q9BV40 100 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 DYSFO75923 2080 aa12.24□□□□□ -0.45
PTPN9-201ENST00000306726 NAV3Q8IVL0 2385 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 DUXBA0A1W2PPF3 345 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 SPINT2O43291 252 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 ZNF585BQ52M93 769 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 TMEM147Q9BVK8 224 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 SRD5A3Q9H8P0 318 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 NAGKQ9UJ70 344 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 FKBP2P26885 142 aaKnown RBP12.23□□□□□ -0.45
PTPN9-201ENST00000306726 OR8B8Q15620 311 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 MOB3BQ86TA1 216 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 SIGLECL1Q8N7X8 197 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 OR2M7Q8NG81 312 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 C17orf112F2Z3M2 114 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 MEOX1P50221 254 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 C10orf35Q96D05 121 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 ZNRD1Q9P1U0 126 aa12.23□□□□□ -0.45
PTPN9-201ENST00000306726 RALYQ9UKM9 306 aaKnown RBP12.23□□□□□ -0.45
PTPN9-201ENST00000306726 ZGRF1Q86YA3 2104 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 PSG5Q15238 335 aa12.22□□□□□ -0.45
PTPN9-201ENST00000306726 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms