RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SPRR3Q9UBC9 169 aa4.5□□□□□ -1.69
VPS50-202ENST00000305866 SMCO3A2RU48 225 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TRAPPC2LH3BP13 241 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 K7EP13 123 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 STAG3L2P0CL84 134 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 STAG3L3P0CL85 134 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 AREGP15514 252 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PRR20EP86478 221 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PRR20CP86479 221 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PRR20DP86480 221 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PRR20BP86481 221 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PRR20AP86496 221 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 OR1C1Q15619 314 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 LCN15Q6UWW0 184 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 ZNF695Q8IW36 515 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PIGCQ92535 297 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TXNDC17Q9BRA2 123 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 MIEN1Q9BRT3 115 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 RTL8AQ9BWD3 113 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TMEM9BQ9NQ34 198 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 MANBALQ9NQG1 85 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 NAGKQ9UJ70 344 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 LY96Q9Y6Y9 160 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TRGV8A0A0C4DH27 118 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TSTD3H0UI37 97 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 CDIPTO14735 213 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 GDF1P27539 372 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 DUTP33316 252 aaKnown RBP4.49□□□□□ -1.69
VPS50-202ENST00000305866 GATA4P43694 442 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 GPM6AP51674 278 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 NCR3LG1Q68D85 454 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 Q6ZT83 130 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 TMPRSS7Q7RTY8 843 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PIP4P2Q8N4L2 257 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 NEUROG1Q92886 237 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 FSCN3Q9NQT6 498 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 PSENENQ9NZ42 101 aa4.49□□□□□ -1.69
VPS50-202ENST00000305866 FCN3O75636 299 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CLDN14O95500 239 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CELA3AP09093 270 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 MYCNOSP40205 109 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 AKR1C8PQ5T2L2 129 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ZNF841Q6ZN19 808 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 TMEM136Q6ZRR5 245 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 TMEM105Q8N8V8 129 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SCCPDHQ8NBX0 429 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 LAMP3Q9UQV4 416 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 DIDO1Q9BTC0 2240 aaKnown RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 TRAV9-1A0A075B6T8 112 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 IGKV1OR2-108A0A075B7D4 117 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 A0A0U1RQK1 487 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ZNF320A2RRD8 509 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 KLRC4-KLRK1H3BQV0 150 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SYNGR4O95473 234 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 OR2H2O95918 312 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 OR9G9P0C7N8 305 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 JMJD7P0C870 316 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 PAX2Q02962 417 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CYB5R2Q6BCY4 276 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SPINK14Q6IE38 97 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 C16orf54Q6UWD8 224 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 IGFL3Q6UXB1 125 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 TREML4Q6UXN2 200 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 MRPL21Q7Z2W9 205 aaKnown RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 P4HA3Q7Z4N8 544 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 STPG4Q8N801 248 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 KCNIP2Q9NS61 270 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ERRFI1Q9UJM3 462 aaPredicted RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 TECTAO75443 2155 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 DOCK7Q96N67 2140 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SMIM27A0A1W2PRY6 76 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 C5orf49A4QMS7 147 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 OOEPA6NGQ2 149 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ANKRD30BLA7E2S9 258 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 PATE3B3GLJ2 98 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 C9JCJ5 164 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CCL25O15444 150 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CRXO43186 299 aaPredicted RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 ZG16O60844 167 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 MBP02144 154 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 ADH4P08319 380 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SP9P0CG40 484 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 IAPPP10997 89 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 IGHV1-2P23083 117 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 IDH3GP51553 393 aaPredicted RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 LOXL3P58215 753 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 TLE1Q04724 770 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SLC38A11Q08AI6 406 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 OR2T10Q8NGZ9 312 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 CORO2AQ92828 525 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SFRP2Q96HF1 295 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 THOC3Q96J01 351 aaKnown RBP4.48□□□□□ -1.69
VPS50-202ENST00000305866 FER1L6-AS2Q96M78 137 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 SMIM7Q9BQ49 75 aa4.48□□□□□ -1.69
VPS50-202ENST00000305866 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms