RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
SCG2-201ENST00000305409 DIRC2Q96SL1 478 aa9.35□□□□□ -0.91
SCG2-201ENST00000305409 SEBOXQ9HB31 216 aaPredicted RBP9.35□□□□□ -0.91
SCG2-201ENST00000305409 COA4Q9NYJ1 87 aa9.35□□□□□ -0.91
SCG2-201ENST00000305409 TANC2Q9HCD6 1990 aa9.35□□□□□ -0.91
SCG2-201ENST00000305409 ARHGAP32A7KAX9 2087 aa9.35□□□□□ -0.91
SCG2-201ENST00000305409 IGHV1-69-2A0A0G2JMI3 117 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 DNASE2O00115 360 aaPredicted RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 HMGB3O15347 200 aaKnown RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 HPRT1P00492 218 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 FBP1P09467 338 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 OR13C7P0DN81 318 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 DEFA4P12838 97 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 C1orf87Q8N0U7 546 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 ZNF439Q8NDP4 499 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 C20orf24Q9BUV8 137 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 TMEM140Q9NV12 185 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 PIGBOS1A0A0B4J2F0 54 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 ZNF729A6NN14 1252 aaPredicted RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 FAM157AC9JC47 383 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 DFFBO76075 338 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 SPSB3Q6PJ21 355 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 LCN15Q6UWW0 184 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 UNQ6494/PRO21346Q6UXR6 183 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 HINT2Q9BX68 163 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 RPRMQ9NS64 109 aa9.34□□□□□ -0.91
SCG2-201ENST00000305409 RPUSD1Q9UJJ7 312 aaKnown RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 STRAPQ9Y3F4 350 aaKnown RBP9.34□□□□□ -0.91
SCG2-201ENST00000305409 NDUFB3O43676 98 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 HBG1P69891 147 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 HBG2P69892 147 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 S100A12P80511 92 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 ABHD12Q8N2K0 398 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 DDB2Q92466 427 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 GNPNAT1Q96EK6 184 aaPredicted RBP9.33□□□□□ -0.92
SCG2-201ENST00000305409 RHOVQ96L33 236 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 LINC00312Q9Y6C7 94 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 CACNA1AO00555 2505 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 SRRM4A7MD48 611 aaKnown RBP9.33□□□□□ -0.92
SCG2-201ENST00000305409 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 FAM90A26D6RGX4 464 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 CT45A6P0DMU7 189 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 CT45A5P0DMU8 189 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 CT45A7P0DMV0 189 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 ATF4P18848 351 aaPredicted RBP9.33□□□□□ -0.92
SCG2-201ENST00000305409 UQCRFS1P47985 274 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 RAB5CP51148 216 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 RAB7AP51149 207 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 ERVK-16P61578 105 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 TFF3Q07654 80 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 SVBPQ8N300 66 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 CD300LFQ8TDQ1 290 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 ZNF714Q96N38 554 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
SCG2-201ENST00000305409 CACNA1BQ00975 2339 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 ZFYVE26Q68DK2 2539 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 PLXNB1O43157 2135 aa9.33□□□□□ -0.92
SCG2-201ENST00000305409 B9A039 149 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 NQO2P16083 231 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 RELBQ01201 579 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 LRRC75BQ2VPJ9 315 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 WDR61Q9GZS3 305 aaKnown RBP9.32□□□□□ -0.92
SCG2-201ENST00000305409 CFAP46Q8IYW2 2715 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 C15orf62A8K5M9 175 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 RRHO14718 337 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 IFNA10P01566 189 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 HFEQ30201 348 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 LRRC10Q5BKY1 277 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 SLC25A48Q6ZT89 311 aaKnown RBP9.32□□□□□ -0.92
SCG2-201ENST00000305409 TAF15Q92804 592 aaKnown RBP eCLIP9.32□□□□□ -0.92
SCG2-201ENST00000305409 MRPL20Q9BYC9 149 aaKnown RBP9.32□□□□□ -0.92
SCG2-201ENST00000305409 HEYLQ9NQ87 328 aaPredicted RBP9.32□□□□□ -0.92
SCG2-201ENST00000305409 LAMP3Q9UQV4 416 aa9.32□□□□□ -0.92
SCG2-201ENST00000305409 SMCO3A2RU48 225 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 UMAD1C9J7I0 102 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 TNFRSF13BO14836 293 aaPredicted RBP9.31□□□□□ -0.92
SCG2-201ENST00000305409 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
SCG2-201ENST00000305409 RAB2AP61019 212 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 C10orf91Q5T1B1 145 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 LINC00518Q8N0U6 118 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 TCTEX1D1Q8N7M0 179 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 OR10P1Q8NGE3 313 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 OR4S2Q8NH73 311 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 CORO2AQ92828 525 aa9.31□□□□□ -0.92
SCG2-201ENST00000305409 CARHSP1Q9Y2V2 147 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms