RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 HSPB1P04792 205 aaKnown RBP20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 SAA1P0DJI8 122 aaPredicted RBP20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 AADACP22760 399 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 EIF4EBP1Q13541 118 aaPredicted RBP20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 MRGPRG-AS1Q2M3A8 158 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 SECTM1Q8WVN6 248 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 DCUN1D4Q92564 292 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 SNAPC3Q92966 411 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 SCOCQ9UIL1 159 aa20.44■□□□□ 0.86
CDKN2A-201ENST00000304494 C13orf42A0A1B0GVH6 325 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 NCS1P62166 190 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 MFSD4AQ8N468 514 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 ZBTB34Q8NCN2 500 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 ACOT12Q8WYK0 555 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 TAS2R8Q9NYW2 309 aa20.43■□□□□ 0.86
CDKN2A-201ENST00000304494 IGHV4OR15-8A0A075B7B6 117 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 A0A087WW49 117 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 MSGN1A6NI15 193 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 FCER2P06734 321 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 SLURP1P55000 103 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 TAS2R20P59543 309 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 VBP1P61758 197 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 MMD2Q8IY49 270 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 VSTM2AQ8TAG5 236 aa20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 SRSF12Q8WXF0 261 aaKnown RBP20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 DLX4Q92988 240 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 ZNF430Q9H8G1 570 aaPredicted RBP20.42■□□□□ 0.86
CDKN2A-201ENST00000304494 MEIS3P1A6NDR6 274 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 ECI1P42126 302 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 KIR2DS2P43631 304 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 ZNF429Q86V71 674 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 GIMAP1Q8WWP7 306 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 TINAGL1Q9GZM7 467 aaPredicted RBP20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 CCL28Q9NRJ3 127 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 COA4Q9NYJ1 87 aa20.41■□□□□ 0.86
CDKN2A-201ENST00000304494 MPPED1O15442 326 aa20.4■□□□□ 0.86
CDKN2A-201ENST00000304494 CMTM3Q96MX0 182 aa20.4■□□□□ 0.86
CDKN2A-201ENST00000304494 SPIN2AQ99865 258 aa20.4■□□□□ 0.86
CDKN2A-201ENST00000304494 SPIN2BQ9BPZ2 258 aa20.4■□□□□ 0.86
CDKN2A-201ENST00000304494 SLC5A7Q9GZV3 580 aa20.4■□□□□ 0.86
CDKN2A-201ENST00000304494 OR2A4O95047 310 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 FXYD4P59646 89 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 BORCS5Q969J3 196 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 OR2A7Q96R45 310 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 RANGRFQ9HD47 186 aaPredicted RBP20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 COMMD3Q9UBI1 195 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 ANAPC10Q9UM13 185 aa20.39■□□□□ 0.85
CDKN2A-201ENST00000304494 SMIM31A0A1B0GVY4 71 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 TNFSF12O43508 249 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 HRASP01112 189 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 OR9G9P0C7N8 305 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 APELAP0DMC3 54 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 PRSS3P35030 304 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 HERV-K104P61576 105 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 ADAD2Q8NCV1 583 aaKnown RBP20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 USMG5Q96IX5 58 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 AIFM2Q9BRQ8 373 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 EHFQ9NZC4 300 aa20.38■□□□□ 0.85
CDKN2A-201ENST00000304494 SAP30O75446 220 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 KBTBD11O94819 623 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 APOA1P02647 267 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 EIF4EP06730 217 aaKnown RBP20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 SMIM18P0DKX4 95 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 BRWD1-AS2P59051 145 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 TAS2R46P59540 309 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 CATR1Q13166 79 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 VKORC1L1Q8N0U8 176 aa20.37■□□□□ 0.85
CDKN2A-201ENST00000304494 NAT1P18440 290 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 ZP3P21754 424 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 RORCP51449 518 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 DHRS11Q6UWP2 260 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 ANKRD13BQ86YJ7 626 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 PUSL1Q8N0Z8 303 aaKnown RBP20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 TMEM167AQ8TBQ9 72 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 GPHA2Q96T91 129 aa20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 ZNF256Q9Y2P7 627 aaPredicted RBP20.36■□□□□ 0.85
CDKN2A-201ENST00000304494 RBFOX2O43251 390 aaKnown RBP eCLIP20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 MAS1LP35410 378 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 CD69Q07108 199 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 DYRK1AQ13627 763 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 ACSM6Q6P461 480 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 SLC25A42Q86VD7 318 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 TMEM17Q86X19 198 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 SPAG16Q8N0X2 631 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 OR5H2Q8NGV7 314 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 PRR25Q96S07 402 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 B9D2Q9BPU9 175 aa20.35■□□□□ 0.85
CDKN2A-201ENST00000304494 GABARAPO95166 117 aa20.34■□□□□ 0.85
CDKN2A-201ENST00000304494 ZNF818PQ6ZRF7 136 aa20.34■□□□□ 0.85
CDKN2A-201ENST00000304494 AP3S1Q92572 193 aa20.34■□□□□ 0.85
CDKN2A-201ENST00000304494 ZNF2Q9BSG1 426 aaPredicted RBP20.34■□□□□ 0.85
CDKN2A-201ENST00000304494 ANKRD34BA5PLL1 514 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 FAM223BA6NKX1 122 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 SULT1C2O00338 296 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 PMP2P02689 132 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 RFX2P48378 723 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 C10orf55Q5SWW7 151 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 ZNF343Q6P1L6 599 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 MZT2AQ6P582 158 aa20.33■□□□□ 0.85
CDKN2A-201ENST00000304494 FAM223AQ8IWN6 122 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms