RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 C1orf210Q8IVY1 113 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 SOSTQ9BQB4 213 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 G6PC2Q9NQR9 355 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 AURKAIP1Q9NWT8 199 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 AHCTF1Q8WYP5 2266 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 NTN1O95631 604 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM92Q6UXU6 159 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TTTY12Q9BZ98 90 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 CBLN4Q9NTU7 201 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MIC13Q5XKP0 118 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 GPR146Q96CH1 333 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 LHFPL6Q9Y693 200 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TET1Q8NFU7 2136 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 HYAL3O43820 417 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 HIST1H1AQ02539 215 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MGAT2Q10469 447 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 KRTCAP3Q53RY4 240 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 NPCDR1Q9BY65 106 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 GSN-AS1Q9NRJ2 163 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 FNDC1Q4ZHG4 1894 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MPV17P39210 176 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 ZAR1Q86SH2 424 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PLXND1Q9Y4D7 1925 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 FAM90A27PA6NNH2 459 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 H7C1H1 209 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 CELA2BP08218 269 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 HSPE1P61604 102 aaKnown RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MEF2CQ06413 473 aaPredicted RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 LINC01559Q495D7 138 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 FGFRL1Q8N441 504 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PPIAL4EA0A075B759 164 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 FAM157AC9JC47 383 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PPIAL4DF5H284 164 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PPIAL4FP0DN26 164 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TRIP6Q15654 476 aaKnown RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 HES3Q5TGS1 186 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 OR4D5Q8NGN0 318 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 TM2D1Q9BX74 207 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 SF3B6Q9Y3B4 125 aaKnown RBP6.57□□□□□ -1.36
SF3B3-201ENST00000302516 PPIAL4AQ9Y536 164 aa6.57□□□□□ -1.36
SF3B3-201ENST00000302516 SFTPCP11686 197 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 UCP2P55851 309 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 PSG4Q00888 419 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 CENPWQ5EE01 88 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 PILRAQ9UKJ1 303 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IGHV1-45A0A0A0MS14 117 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 ODAMA1E959 279 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 COL9A1P20849 921 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 CSRP3P50461 194 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 FUT5Q11128 374 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 RRN3P1Q2M238 152 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 C2orf83Q53S99 150 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 CYP2G1PQ6ZSU1 146 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IGHV3OR15-7A0A075B7D8 119 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IGKV1-8A0A0C4DH67 115 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 MFAP4P55083 255 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 DCAF10Q5QP82 559 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM14DPA8MWL7 114 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 GCHFRP30047 84 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 FHL5Q5TD97 284 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IDI2-AS1Q9NZ38 188 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 FOXS1O43638 330 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IGHV3-13P01766 116 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 IGHV3-7P01780 117 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 C1orf185Q5T7R7 199 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 OR11H4Q8NGC9 324 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 GATAD1Q8WUU5 269 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 PRELID3AQ96N28 172 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF729A6NN14 1252 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-201ENST00000302516 OR11H12B2RN74 326 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 ZNF708P17019 499 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-201ENST00000302516 DEFB123Q8N688 67 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 OR11H1Q8NG94 326 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 OR11H2Q8NH07 326 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 SGK494Q96LW2 274 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 FOXJ2Q9P0K8 574 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 NACAE9PAV3 2078 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 LOC102724200A0A096LPH7 203 aaPredicted RBP6.56□□□□□ -1.36
SF3B3-201ENST00000302516 PRR33A8MZF0 331 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 SCTP09683 121 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 TMEM186Q96B77 213 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 DTX4Q9Y2E6 619 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 C19orf48Q6RUI8 117 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 NIT1Q86X76 327 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 CALYQ9NYX4 217 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 ANAPC1Q9H1A4 1944 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 MYO7BQ6PIF6 2116 aa6.56□□□□□ -1.36
SF3B3-201ENST00000302516 SPTBN1Q01082 2364 aaKnown RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 LOC105371267A0A1B0GV96 52 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 RECKO95980 971 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 FAM131CQ96AQ9 280 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 WDYHV1Q96HA8 205 aa6.55□□□□□ -1.36
SF3B3-201ENST00000302516 RCC1LQ96I51 464 aaKnown RBP6.55□□□□□ -1.36
SF3B3-201ENST00000302516 TBL2Q9Y4P3 447 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms