RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CIB3Q96Q77 187 aaPredicted RBP12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 AUP1Q9Y679 476 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 H0YJW9 148 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 NDUFS8O00217 210 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 TXNL1O43396 289 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 LY86O95711 162 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 COX7A1P24310 79 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 MC5RP33032 325 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 RAB13P51153 203 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 ATP5J2P56134 94 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 PDPNQ86YL7 162 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 UBAC2Q8NBM4 344 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 CLDND2Q8NHS1 167 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 FAM168AQ92567 244 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 SLC25A32Q9H2D1 315 aa12.78□□□□□ -0.36
HERPUD1-201ENST00000300302 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.36
HERPUD1-201ENST00000300302 ANKRD34BA5PLL1 514 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 H3BP45 60 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 BUB1B-PAK6H3BSN5 160 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 SHOXO15266 292 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 IFNA17P01571 189 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 IGKV1-16P04430 117 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 SULT1A1P50225 295 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 ZNF266Q14584 549 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 OR4A47Q6IF82 309 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 PNKDQ8N490 385 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 Q8N7P7 452 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 OR4C13Q8NGP0 309 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 OR52E5Q8NH55 327 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 DTD1Q8TEA8 209 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 LHX4Q969G2 390 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 FLYWCH2Q96CP2 140 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 QTRT1Q9BXR0 403 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 WASHC3Q9Y3C0 194 aa12.77□□□□□ -0.37
HERPUD1-201ENST00000300302 CEBPZOSA8MTT3 80 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 A8MXK9 166 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 CST7O76096 145 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 PRTN3P24158 256 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 OR2B8PP59922 312 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 SPCS3P61009 180 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 RELBQ01201 579 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 ZNF295-AS1Q8N0V1 137 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 PCNPQ8WW12 178 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 CLCC1Q96S66 551 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 NUP50Q9UKX7 468 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 SPTAN1Q13813 2472 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 ZFP36P26651 326 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 DLX1P56177 255 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 LMO4P61968 165 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 DIAPH2-AS1Q14236 149 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 TMEM177Q53S58 311 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 SPANXN5Q5MJ07 72 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 OR1S2Q8NGQ3 325 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 LRRC20Q8TCA0 184 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 HARBI1Q96MB7 349 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
HERPUD1-201ENST00000300302 C15orf61A6NNL5 157 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 LEUTXA8MZ59 168 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 FOXH1O75593 365 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 HBG1P69891 147 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 HBG2P69892 147 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 LCN2P80188 198 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 PDZD9Q8IXQ8 264 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 TMEM217Q8N7C4 229 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 OR4P4Q8NGL7 312 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 TMED6Q8WW62 240 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 RPEQ96AT9 228 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 SIRT7Q9NRC8 400 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 PRNDQ9UKY0 176 aa12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 FOXA2Q9Y261 457 aaPredicted RBP12.75□□□□□ -0.37
HERPUD1-201ENST00000300302 DFFBO76075 338 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 ARG1P05089 322 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 NMBP08949 121 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 DYNLT3P51808 116 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 TMEM267Q0VDI3 215 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 CLINT1Q14677 625 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 BET1LQ9NYM9 111 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 INSIG2Q9Y5U4 225 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 IGHV2-70DA0A0C4DH43 119 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 HTR1DP28221 377 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 CEACAM3P40198 252 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 RPP30P78346 268 aaKnown RBP12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 PRB3Q04118 309 aaPredicted RBP12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 RNF141Q8WVD5 230 aa12.74□□□□□ -0.37
HERPUD1-201ENST00000300302 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms