RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 RFPL3SP0C7P2 107 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 Q8N7P7 452 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 SSMEM1Q8WWF3 244 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 A0A1W2PS18 150 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 C3orf79P0CE67 100 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 RAC2P15153 192 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 SRYQ05066 204 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 UBE2V1Q13404 147 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 GGNQ86UU5 652 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 OR52L2PQ8NGH6 319 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 FSCN3Q9NQT6 498 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 WDR83OSQ9Y284 106 aa10.9□□□□□ -0.66
TVP23A-201ENST00000299866 ZNF503-AS2A6NEH8 195 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 DPRXA6NFQ7 191 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 CLDN14O95500 239 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF83P51522 516 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 GNG3P63215 75 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 Q6P435 159 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 RNF24Q9Y225 148 aa10.9□□□□□ -0.67
TVP23A-201ENST00000299866 C15orf62A8K5M9 175 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 NPIPB11E5RHQ5 1161 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 MRPL33O75394 65 aaKnown RBP10.89□□□□□ -0.67
TVP23A-201ENST00000299866 CEBPDP49716 269 aaPredicted RBP10.89□□□□□ -0.67
TVP23A-201ENST00000299866 B3GALT5-AS1P59052 145 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 FXYD3Q14802 87 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 TRIP6Q15654 476 aaKnown RBP10.89□□□□□ -0.67
TVP23A-201ENST00000299866 RIPPLY2Q5TAB7 128 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 RPS19BP1Q86WX3 136 aaKnown RBP10.89□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF738Q8NE65 137 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 OR2M7Q8NG81 312 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 C5orf30Q96GV9 206 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 SRIP30626 198 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 GFRA1P56159 465 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 MRPL54Q6P161 138 aaKnown RBP10.89□□□□□ -0.67
TVP23A-201ENST00000299866 LINC00596Q86U02 117 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 OR4C5Q8NGB2 326 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 IFI44Q8TCB0 444 aa10.89□□□□□ -0.67
TVP23A-201ENST00000299866 URB1O60287 2271 aaKnown RBP10.88□□□□□ -0.67
TVP23A-201ENST00000299866 EN2P19622 333 aaPredicted RBP10.88□□□□□ -0.67
TVP23A-201ENST00000299866 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF497Q6ZNH5 498 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 SYT13Q7L8C5 426 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 BET1LQ9NYM9 111 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 NEURL1O76050 574 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 CXorf1O96002 111 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 GUSBP11Q6P575 273 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF645Q8N7E2 425 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 TSPOP30536 169 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 BRWD1-AS2P59051 145 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 CATR1Q13166 79 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
TVP23A-201ENST00000299866 DOLPP1Q86YN1 238 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 TCTEX1D1Q8N7M0 179 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 BORCS7Q96B45 105 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 GMPPAQ96IJ6 420 aaPredicted RBP10.88□□□□□ -0.67
TVP23A-201ENST00000299866 OCIAD1Q9NX40 245 aa10.88□□□□□ -0.67
TVP23A-201ENST00000299866 LOC105371242A0A075B767 164 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 CBY3A6NI87 242 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 ITGB1BP1O14713 200 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 FOXH1O75593 365 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 CCL7P80098 99 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 MOB1BQ7L9L4 216 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 KLHDC1Q8N7A1 406 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 EAF1Q96JC9 268 aaPredicted RBP10.87□□□□□ -0.67
TVP23A-201ENST00000299866 RNASE7Q9H1E1 156 aaKnown RBP10.87□□□□□ -0.67
TVP23A-201ENST00000299866 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 IGHV3-43A0A0B4J1X8 118 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 ZNF324O75467 553 aaPredicted RBP10.87□□□□□ -0.67
TVP23A-201ENST00000299866 IGHV3-43DP0DP04 118 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 PRRX1P54821 245 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 GTF3C1Q12789 2109 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 VASH2Q86V25 355 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
TVP23A-201ENST00000299866 IGHV1-45A0A0A0MS14 117 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 A0A1W2PQM1 296 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 DEFB108AA8MXU0 73 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 P0C879 139 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 OTX2P32243 289 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 CDKN1BP46527 198 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 VAMP3Q15836 100 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 RAB1CQ92928 201 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 PLPPR2Q96GM1 343 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 SFXN3Q9BWM7 321 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 V9GYV3 84 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 C2CD4DB7Z1M9 353 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 M0QZ24 198 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 RAB29O14966 203 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 DNPH1O43598 174 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 NXPH2O95156 264 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 P04436 131 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 GCHFRP30047 84 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 SRD5A2P31213 254 aa10.86□□□□□ -0.67
TVP23A-201ENST00000299866 HOXA4Q00056 320 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms