RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 IL4P05112 153 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 STPG3Q8N7X2 389 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FOXC2Q99958 501 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 MRPL13Q9BYD1 178 aaKnown RBP11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 SCN2AQ99250 2005 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 A0A0G2JMM0 328 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 A0A1W2PPB8 328 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 A0A1W2PRS3 328 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 C7orf66A4D0T2 115 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 KIR3DP1A8MWS1 328 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FCARP24071 287 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 EMP1P54849 157 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PLP1P60201 277 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PCSK4Q6UW60 755 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FDCSPQ8NFU4 85 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CBLN4Q9NTU7 201 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ATAD5Q96QE3 1844 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FAM27E3Q08E93 113 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ASPHD2Q6ICH7 369 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FADS6Q8N9I5 356 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR10S1Q8NGN2 331 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TMEM160Q9NX00 188 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PROB1E7EW31 1015 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ERVH48-1M5A8F1 160 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PF4P02776 101 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PSG9Q00887 426 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TMEM187Q14656 261 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CLPPQ16740 277 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 DRAM1Q8N682 238 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TMEM45BQ96B21 275 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 POLR2AP24928 1970 aaKnown RBP11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TRBV5-7A0A0A0MS05 114 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 GCGP01275 180 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FABP2P12104 132 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 EIF4EBP2Q13542 120 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 C1QL2Q7Z5L3 287 aa11.57□□□□□ -0.56
CHRFAM7A-201ENST00000299847 KNL1Q8NG31 2342 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 AGAP20933 346 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ST6GALNAC6Q969X2 333 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 NPIPB8E9PQR5 432 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ERGP11308 486 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TFF3Q07654 80 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 KLRB1Q12918 225 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FHL5Q5TD97 284 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 Q96M66 194 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FAM106AQ4KMX7 169 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 NPFFO15130 113 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 GFRA3O60609 400 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 C8orf88P0DMB2 117 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 HSPE1P61604 102 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 NABP2Q9BQ15 211 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TCF19Q9Y242 345 aa11.56□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 PIKFYVEQ9Y2I7 2098 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 SFTPCP11686 197 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 SFRP2Q96HF1 295 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CLEC7AQ9BXN2 247 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OTOFQ9HC10 1997 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ZNF98A6NK75 572 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CBLN1P23435 193 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 EGR4Q05215 589 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TBL2Q9Y4P3 447 aaKnown RBP11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 COL4A5P29400 1685 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 MPDU1O75352 247 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ALX4Q9H161 411 aaPredicted RBP11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TRBV20OR9-2A0A075B6H5 130 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 SLC17A3O00476 420 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 GREM1O60565 184 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 CENPWQ5EE01 88 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ERASQ7Z444 233 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TMEM54Q969K7 222 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
CHRFAM7A-201ENST00000299847 IGKV3D-20A0A0C4DH25 116 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 M0R381 172 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TRGV3P03979 118 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ICAM4Q14773 271 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 LAMTOR1Q6IAA8 161 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 COL11A1P12107 1806 aaPredicted RBP11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 ITLN2Q8WWU7 325 aaPredicted RBP11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 TMEM238LA0A1B0GVL6 79 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 A6NJY4 79 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 UCNP55089 124 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR51G1Q8NGK1 321 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 OR5P3Q8WZ94 311 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 FBXL15Q9H469 300 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 HTN3P15516 51 aa11.54□□□□□ -0.56
CHRFAM7A-201ENST00000299847 NPPCP23582 126 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms