RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 UCN2Q96RP3 112 aa12.4□□□□□ -0.43
SPRED1-201ENST00000299084 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.43
SPRED1-201ENST00000299084 HOXA6P31267 233 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 NAPSAO96009 420 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 HBBP68871 147 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 ZNF385CQ66K41 422 aaPredicted RBP12.39□□□□□ -0.43
SPRED1-201ENST00000299084 RHOVQ96L33 236 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 USP54Q70EL1 1684 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 ANKRD36A6QL64 1941 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 CTSVO60911 334 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 C3orf36Q3SXR2 165 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 APOMO95445 188 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 FOLR2P14207 255 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 R3HDMLQ9H3Y0 253 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 RPRMQ9NS64 109 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 CHD3Q12873 2000 aaKnown RBP12.39□□□□□ -0.43
SPRED1-201ENST00000299084 C7orf77A4D0Y5 90 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 ACSF3Q4G176 576 aaPredicted RBP12.39□□□□□ -0.43
SPRED1-201ENST00000299084 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
SPRED1-201ENST00000299084 TCRBV16S1A1N1A0A5B0 115 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 SEPSECSQ9HD40 501 aaKnown RBP12.38□□□□□ -0.43
SPRED1-201ENST00000299084 PLXNB2O15031 1838 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 A0A087WX48 190 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 OR51G1Q8NGK1 321 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 SERGEFQ9UGK8 458 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 JPT2Q9H910 190 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 SLC25A15Q9Y619 301 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 PLPP2O43688 288 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 RPS11P62280 158 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPRED1-201ENST00000299084 FUNDC1Q8IVP5 155 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 MTFP1Q9UDX5 166 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 ARAP2Q8WZ64 1704 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 KMT2EQ8IZD2 1858 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 SCN7AQ01118 1682 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 DSPPQ9NZW4 1301 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
SPRED1-201ENST00000299084 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
SPRED1-201ENST00000299084 SERF2P84101 59 aa12.38□□□□□ -0.43
SPRED1-201ENST00000299084 COLCA1Q6ZS62 124 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 IGLV3-27P01718 113 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 SPSB4Q96A44 273 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 IGHV3-35A0A0C4DH35 117 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 ZFPL1O95159 310 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 TPRX1Q8N7U7 411 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 OR9G1Q8NH87 305 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 RCC2Q9P258 522 aaKnown RBP12.37□□□□□ -0.43
SPRED1-201ENST00000299084 IL20Q9NYY1 176 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 BIVMQ86UB2 503 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 A0A1B0GV90 55 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 NPIPB4C9JG80 1138 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 ST6GALNAC3Q8NDV1 305 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SPRED1-201ENST00000299084 LEPP41159 167 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 RRHO14718 337 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 SOCS1O15524 211 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 PTP4A3O75365 173 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 ZNF107Q9UII5 783 aaPredicted RBP12.36□□□□□ -0.43
SPRED1-201ENST00000299084 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 NKX2-6A6NCS4 301 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 COL9A1P20849 921 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 SURF2Q15527 256 aaPredicted RBP12.36□□□□□ -0.43
SPRED1-201ENST00000299084 FOXB2Q5VYV0 432 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 MAVSQ7Z434 540 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 TMEM186Q96B77 213 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 OR51M1Q9H341 326 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 TCF23Q7RTU1 214 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
SPRED1-201ENST00000299084 CACNA1GO43497 2377 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 ZNF562Q6V9R5 426 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 LRTM2Q8N967 370 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
SPRED1-201ENST00000299084 RAG2P55895 527 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 PAX2Q02962 417 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 CEACAM21Q3KPI0 293 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 ANAPC13Q9BS18 74 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
SPRED1-201ENST00000299084 SAP30O75446 220 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPRED1-201ENST00000299084 SCGB3A1Q96QR1 104 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 SLC25A2Q9BXI2 301 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 CTGFP29279 349 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 CHCHD5Q9BSY4 110 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 SLC25A37Q9NYZ2 338 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 SRSF7Q16629 238 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPRED1-201ENST00000299084 PPP1R27Q86WC6 154 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 PMCHL2Q9BQD1 86 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
SPRED1-201ENST00000299084 ST6GALNAC2Q9UJ37 374 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 INSP01308 110 aa12.35□□□□□ -0.43
SPRED1-201ENST00000299084 TRAF4Q9BUZ4 470 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms