RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
TTC39B-201ENST00000297615 KMT2EQ8IZD2 1858 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 IGHV3-72A0A0B4J1Y9 119 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 SMIM21Q3B7S5 101 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
TTC39B-201ENST00000297615 LINC00596Q86U02 117 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 FRZBQ92765 325 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 IL22RA2Q969J5 263 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 SLC25A15Q9Y619 301 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 PROP1O75360 226 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 CHRNA7P36544 502 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 CATR1Q13166 79 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 MSMO1Q15800 293 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 PRAMEF5Q5TYX0 476 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 Q8IYB0 196 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 SSMEM1Q8WWF3 244 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
TTC39B-201ENST00000297615 LAMP3Q9UQV4 416 aa11.24□□□□□ -0.61
TTC39B-201ENST00000297615 TRGV8A0A0C4DH27 118 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 CCL3L1P16619 93 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 LMO1P25800 156 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 TNFAIP6P98066 277 aaPredicted RBP11.23□□□□□ -0.61
TTC39B-201ENST00000297615 ZNF146Q15072 292 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.23□□□□□ -0.61
TTC39B-201ENST00000297615 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
TTC39B-201ENST00000297615 LRRC30A6NM36 301 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 MARCH11A6NNE9 402 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 S100A8P05109 93 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 OR9G9P0C7N8 305 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
TTC39B-201ENST00000297615 MLANAQ16655 118 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 TMEM41BQ5BJD5 291 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 MOB1BQ7L9L4 216 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 MOB3BQ86TA1 216 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
TTC39B-201ENST00000297615 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 PRO1933Q9H354 126 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
TTC39B-201ENST00000297615 A0A1W2PRD5 423 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 A0A1W2PRF3 423 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 A0A1W2PRM7 423 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 FAM90A27PA6NNH2 459 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 SPINT2O43291 252 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 IGHV2-5P01817 119 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 SOD3P08294 240 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 LINC01560Q8TB33 94 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 RAB24Q969Q5 203 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 OOEPA6NGQ2 149 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 RNF212BA8MTL3 300 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 AHRRA9YTQ3 701 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 PPP1R2P9O14990 202 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 CA5BP1Q8WTZ4 195 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 ZNF251Q9BRH9 671 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 WASF3Q9UPY6 502 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 USP9YO00507 2555 aaPredicted RBP11.22□□□□□ -0.61
TTC39B-201ENST00000297615 CSPG4Q6UVK1 2322 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 C16orf82Q7Z2V1 217 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
TTC39B-201ENST00000297615 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
TTC39B-201ENST00000297615 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 CLDN34H7C241 214 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 CGAP01215 116 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 SMIM6P0DI80 62 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 SLC25A6P12236 298 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.61
TTC39B-201ENST00000297615 MEF2BQ02080 365 aaPredicted RBP11.21□□□□□ -0.61
TTC39B-201ENST00000297615 SRSF7Q16629 238 aaKnown RBP eCLIP11.21□□□□□ -0.61
TTC39B-201ENST00000297615 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 DOLPP1Q86YN1 238 aa11.21□□□□□ -0.61
TTC39B-201ENST00000297615 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
TTC39B-201ENST00000297615 A0A0G2JNJ9 132 aa11.21□□□□□ -0.62
TTC39B-201ENST00000297615 ACTL6BO94805 426 aa11.21□□□□□ -0.62
TTC39B-201ENST00000297615 GATA2P23769 480 aaPredicted RBP11.21□□□□□ -0.62
TTC39B-201ENST00000297615 PSMB3P49720 205 aa11.21□□□□□ -0.62
TTC39B-201ENST00000297615 CD81P60033 236 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms