RNA–Protein interactions for RNA: ENST00000296812.6

FBXO4-202, Transcript of F-box protein 4, humanhuman

TSL 1 (best) BASIC

Gene FBXO4, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-202ENST00000296812 AUP1Q9Y679 476 aa13.68□□□□□ -0.22
FBXO4-202ENST00000296812 hCG_1809904A0A1W2PP81 198 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 A0A1W2PPE2 198 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 A0A1W2PR64 198 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 A0A1W2PRV1 198 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 IGSF23A1L1A6 192 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 FAM24AA6NFZ4 105 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 FCGR3BO75015 233 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 TMEM50AO95807 157 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 PRTN3P24158 256 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CAV2P51636 162 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 DVL1P1P54792 670 aaPredicted RBP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 EWSR1Q01844 656 aaKnown RBP eCLIP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 VMO1Q7Z5L0 202 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 PNKDQ8N490 385 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 C1orf159Q96HA4 380 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CITED4Q96RK1 184 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CLEC7AQ9BXN2 247 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 REG4Q9BYZ8 158 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 LYRM2Q9NU23 88 aaPredicted RBP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 SVEP1Q4LDE5 3571 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CSPG4Q6UVK1 2322 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 AKAP9Q99996 3911 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CELSR1Q9NYQ6 3014 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 LEUTXA8MZ59 168 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 RAB29O14966 203 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CHST1O43916 411 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 ATG12O94817 140 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 IGLV1-47P01700 117 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 LOXL1Q08397 574 aaPredicted RBP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 DIAPH2-AS1Q14236 149 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 COMMD7Q86VX2 200 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 CD300LFQ8TDQ1 290 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 TBX15Q96SF7 602 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 SLC25A32Q9H2D1 315 aa13.67□□□□□ -0.22
FBXO4-202ENST00000296812 UNKLQ9H9P5 680 aaKnown RBP13.67□□□□□ -0.22
FBXO4-202ENST00000296812 MYO9AB2RTY4 2548 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 PAX9P55771 341 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 NHLH2Q02577 135 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 WFDC11Q8NEX6 87 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 TMED6Q8WW62 240 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 COA4Q9NYJ1 87 aa13.66□□□□□ -0.22
FBXO4-202ENST00000296812 TET2Q6N021 2002 aaPredicted RBP13.66□□□□□ -0.22
FBXO4-202ENST00000296812 RNASEK-C17orf49H0YIS7 233 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 GAPDHP04406 335 aaKnown RBP13.65□□□□□ -0.22
FBXO4-202ENST00000296812 MSMBP08118 114 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
FBXO4-202ENST00000296812 PAX8Q06710 450 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 HLA-DRB5Q30154 266 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 MIDNQ504T8 468 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 LDLRAD2Q5SZI1 272 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 PDZD9Q8IXQ8 264 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 DDB2Q92466 427 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 ST6GALNAC6Q969X2 333 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 RBMXL1Q96E39 390 aaKnown RBP13.65□□□□□ -0.22
FBXO4-202ENST00000296812 PCGF1Q9BSM1 259 aa13.65□□□□□ -0.22
FBXO4-202ENST00000296812 FLNAP21333 2647 aaKnown RBP13.65□□□□□ -0.22
FBXO4-202ENST00000296812 ANKRD34BA5PLL1 514 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 TOX4O94842 621 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 EIF5AP63241 154 aaKnown RBP13.64□□□□□ -0.23
FBXO4-202ENST00000296812 ZNF833PQ6ZTB9 187 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 TMEM252Q8N6L7 170 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 BEND2Q8NDZ0 799 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 OR4P4Q8NGL7 312 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 OR10X1Q8NGY0 326 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 S1PR3Q99500 378 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 SLC25A31Q9H0C2 315 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 PRELID3BQ9Y3B1 194 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 B4DSR2 109 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 TOR1AO14656 332 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
FBXO4-202ENST00000296812 SYNGR2O43760 224 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 JTBO76095 146 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 HPRT1P00492 218 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 RRASP10301 218 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 IAPPP10997 89 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 THBS3P49746 956 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 ZNF137PP52743 207 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 H2BFWTQ7Z2G1 175 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 OR13D1Q8NGV5 346 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 FOXC2Q99958 501 aa13.64□□□□□ -0.23
FBXO4-202ENST00000296812 TNCP24821 2201 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 TEX15Q9BXT5 2789 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 ODF3BA8MYP8 253 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 FAM90A26D6RGX4 464 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 H3BP45 60 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 REG1BP48304 166 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 PRRX1P54821 245 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
FBXO4-202ENST00000296812 ZNF383Q8NA42 475 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 FAM210AQ96ND0 272 aa13.63□□□□□ -0.23
FBXO4-202ENST00000296812 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
FBXO4-202ENST00000296812 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms