RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 PRB4P10163 310 aaPredicted RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 KITLGP21583 273 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 DLK1P80370 383 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 TAF15Q92804 592 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 WFIKKN1Q96NZ8 548 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 SLC25A10Q9UBX3 287 aaPredicted RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 ZMAT5Q9UDW3 170 aaKnown RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 KLF2Q9Y5W3 355 aaPredicted RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 K7N7A8 449 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 HBE1P02100 147 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 HSPB1P04792 205 aaKnown RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 GNB1P62873 340 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 RAB39BQ96DA2 213 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 RCC1LQ96I51 464 aaKnown RBP7.72□□□□□ -1.17
PRDM9-201ENST00000296682 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 RNF115Q9Y4L5 304 aa7.72□□□□□ -1.17
PRDM9-201ENST00000296682 MYO18BQ8IUG5 2567 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 DUXBA0A1W2PPF3 345 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.71□□□□□ -1.17
PRDM9-201ENST00000296682 PLAUP00749 431 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 ADH4P08319 380 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 RD3LP0DJH9 198 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 EIF2S3LQ2VIR3 472 aaKnown RBP7.71□□□□□ -1.17
PRDM9-201ENST00000296682 ZNF525Q8N782 197 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 C5orf30Q96GV9 206 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 ACY3Q96HD9 319 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 HSD17B10Q99714 261 aaKnown RBP7.71□□□□□ -1.17
PRDM9-201ENST00000296682 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 COL25A1Q9BXS0 654 aaPredicted RBP7.71□□□□□ -1.17
PRDM9-201ENST00000296682 TMEM140Q9NV12 185 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 LRBAP50851 2863 aa7.71□□□□□ -1.17
PRDM9-201ENST00000296682 CSPG4Q6UVK1 2322 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 HIVEP3Q5T1R4 2406 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 NKX6-3A6NJ46 265 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 PAGE4O60829 102 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 CD5P06127 495 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 GATA2P23769 480 aaPredicted RBP7.71□□□□□ -1.18
PRDM9-201ENST00000296682 GRNP28799 593 aaKnown RBP7.71□□□□□ -1.18
PRDM9-201ENST00000296682 NDUFA6P56556 154 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 RHEBQ15382 184 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 STUMQ69YW2 141 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 LFNGQ8NES3 379 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 PRR7Q8TB68 274 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 IGFBPL1Q8WX77 278 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 DOK5Q9P104 306 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 CYB5BO43169 146 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 S100A9P06702 114 aaKnown RBP7.71□□□□□ -1.18
PRDM9-201ENST00000296682 CD200P41217 278 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 LY6DQ14210 128 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 RTP5Q14D33 572 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 TBR1Q16650 682 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 HAPLN4Q86UW8 402 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 SLC35D1Q9NTN3 355 aa7.71□□□□□ -1.18
PRDM9-201ENST00000296682 RRHO14718 337 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 NDUFB3O43676 98 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 IGLV1-44P01699 117 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 CT45A1Q5HYN5 189 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 MIC13Q5XKP0 118 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 LHFPL4Q7Z7J7 247 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 CT45A3Q8NHU0 189 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 IL22RA2Q969J5 263 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 LSM10Q969L4 123 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 TANC2Q9HCD6 1990 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PPIAL4EA0A075B759 164 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 SAA2-SAA4A0A096LPE2 208 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PPIAL4DF5H284 164 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 REG1AP05451 166 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 SAA2P0DJI9 122 aaPredicted RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PPIAL4FP0DN26 164 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 DUTP33316 252 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 NCMAPQ5T1S8 102 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 MBNL2Q5VZF2 373 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 LYPD2Q6UXB3 125 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 CA5BP1Q8WTZ4 195 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 WDR61Q9GZS3 305 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 UNKLQ9H9P5 680 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 CISD1Q9NZ45 108 aaKnown RBP7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PPIAL4AQ9Y536 164 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 IFNL4K9M1U5 179 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 IFNA1P01562 189 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 CHRNB4P30926 498 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PSMB3P49720 205 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 PLGLAQ15195 96 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 MLANAQ16655 118 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 ODF3L1Q8IXM7 274 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 LURAP1Q96LR2 239 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 NGBQ9NPG2 151 aa7.7□□□□□ -1.18
PRDM9-201ENST00000296682 hADV38S2A0JD32 116 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
PRDM9-201ENST00000296682 TIMP3P35625 211 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 WDR25Q64LD2 544 aaPredicted RBP7.69□□□□□ -1.18
PRDM9-201ENST00000296682 SSX7Q7RTT5 188 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 RAB24Q969Q5 203 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 NDRG3Q9UGV2 375 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 DSCAMO60469 2012 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 PIGBOS1A0A0B4J2F0 54 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 IGKV1-16P04430 117 aa7.69□□□□□ -1.18
PRDM9-201ENST00000296682 CD1BP29016 333 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms