RNA–Protein interactions for RNA: ENST00000295718.6

PTPRN-201, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRN, Length 3,784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-201ENST00000295718 RANP62826 216 aaKnown RBP12.21□□□□□ -0.45
PTPRN-201ENST00000295718 OR4C5Q8NGB2 326 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 SH3BGRL2Q9UJC5 107 aa12.21□□□□□ -0.45
PTPRN-201ENST00000295718 HSBP1L1C9JCN9 74 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 RRHO14718 337 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 SPRY3O43610 288 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 CELA3BP08861 270 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 SRP14P37108 136 aaKnown RBP12.21□□□□□ -0.46
PTPRN-201ENST00000295718 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 MOB1BQ7L9L4 216 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 LRRC29Q8WV35 223 aa12.21□□□□□ -0.46
PTPRN-201ENST00000295718 ZNF716A6NP11 495 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 ENSAO43768 121 aaKnown RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 PDE6DO43924 150 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 ZNF324BQ6AW86 544 aaPredicted RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 BLNKQ8WV28 456 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 FAM122AQ96E09 287 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 A0A1B0GW64 132 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 PINLYPA6NC86 204 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 HELTA6NFD8 242 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 SRIP30626 198 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 RPL30P62888 115 aaKnown RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 RBMXL3Q8N7X1 1067 aaKnown RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 MBD3L1Q8WWY6 194 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 PRDM14Q9GZV8 571 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 CHRNA10Q9GZZ6 450 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 TNCP24821 2201 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 IGLV3-12A0A075B6K2 115 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 PFN1P07737 140 aaKnown RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 CCL11P51671 97 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 CT55Q8WUE5 264 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 ZCCHC14Q8WYQ9 949 aaKnown RBP12.2□□□□□ -0.46
PTPRN-201ENST00000295718 FAM173AQ9BQD7 235 aa12.2□□□□□ -0.46
PTPRN-201ENST00000295718 CD46P15529 392 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 CD82P27701 267 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 MMDQ15546 238 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 WDYHV1Q96HA8 205 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 RHOBP62745 196 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 OR5P3Q8WZ94 311 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 RND1Q92730 232 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 LSM10Q969L4 123 aaKnown RBP12.19□□□□□ -0.46
PTPRN-201ENST00000295718 DAZAP1Q96EP5 407 aaKnown RBP12.19□□□□□ -0.46
PTPRN-201ENST00000295718 C2orf88Q9BSF0 95 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 C1QTNF5Q9BXJ0 243 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 RNF115Q9Y4L5 304 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 B4E171 279 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 TOX3O15405 576 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-201ENST00000295718 CA1P00915 261 aaPredicted RBP12.19□□□□□ -0.46
PTPRN-201ENST00000295718 TSPAN7P41732 249 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 HAPLN4Q86UW8 402 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
PTPRN-201ENST00000295718 IGKV1-39P01597 117 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 IGKV1D-39P04432 117 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
PTPRN-201ENST00000295718 ZNF137PP52743 207 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 MFAP2P55001 183 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 GNB1P62873 340 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 COL5A1-AS1Q5SY13 56 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 MMD2Q8IY49 270 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 NPSP0C0P6 89 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 S100A7P31151 101 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 MEOX1P50221 254 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 RAB7AP51149 207 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 RIPPLY2Q5TAB7 128 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
PTPRN-201ENST00000295718 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
PTPRN-201ENST00000295718 IL36GQ9NZH8 169 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 IGHV3-21A0A0B4J1V1 117 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 CGAP01215 116 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 CHRNB4P30926 498 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 RND2P52198 227 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 UBE2G1P62253 170 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 OR2M7Q8NG81 312 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 SSC4DQ8WTU2 575 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 IMMP1LQ96LU5 166 aa12.18□□□□□ -0.46
PTPRN-201ENST00000295718 KLRC4-KLRK1H3BQV0 150 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 H3BTX0 84 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 M0R2Z0 102 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 PCSK4Q6UW60 755 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 Q6ZPA2 131 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 GBGT1Q8N5D6 347 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 ZNF596Q8TC21 504 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 DECR2Q9NUI1 292 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 TMEM106BQ9NUM4 274 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 TBL2Q9Y4P3 447 aaKnown RBP12.17□□□□□ -0.46
PTPRN-201ENST00000295718 NEURL1O76050 574 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 BRS3P32247 399 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 UCP2P55851 309 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 ABLIM2Q6H8Q1 611 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
PTPRN-201ENST00000295718 TGIF2LYQ8IUE0 185 aa12.17□□□□□ -0.46
PTPRN-201ENST00000295718 TMEM251Q8N6I4 163 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms