RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 NKX1-2Q9UD57 310 aaPredicted RBP6.99□□□□□ -1.29
CNOT9-202ENST00000295701 ZNF230Q9UIE0 474 aaPredicted RBP6.99□□□□□ -1.29
CNOT9-202ENST00000295701 HSF4Q9ULV5 492 aa6.99□□□□□ -1.29
CNOT9-202ENST00000295701 KCNK7Q9Y2U2 307 aa6.99□□□□□ -1.29
CNOT9-202ENST00000295701 LSM2Q9Y333 95 aaKnown RBP6.99□□□□□ -1.29
CNOT9-202ENST00000295701 LINC00473A8K010 186 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 PPP5D1E7EU14 171 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 PTGES3LE9PB15 166 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 J3QRK9 145 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 SLC17A2O00624 439 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 FABP7O15540 132 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 TPPPO94811 219 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 OR2A4O95047 310 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 CDK1P06493 297 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 OR9G9P0C7N8 305 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 PI3P19957 117 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 RHOGP84095 191 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 EXOSC2Q13868 293 aaKnown RBP6.98□□□□□ -1.29
CNOT9-202ENST00000295701 PRSS8Q16651 343 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 TMEM177Q53S58 311 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 C10orf55Q5SWW7 151 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 LIPKQ5VXJ0 399 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 SRSF12Q8WXF0 261 aaKnown RBP6.98□□□□□ -1.29
CNOT9-202ENST00000295701 TMEM68Q96MH6 324 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 C12orf4Q9NQ89 552 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 MGAT4AQ9UM21 535 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 DMRT1Q9Y5R6 373 aa6.98□□□□□ -1.29
CNOT9-202ENST00000295701 IGKV1D-8A0A087WSZ0 117 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 TRBV6-7A0A0A0MS04 114 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 TRBV9A0A0B4J1U6 114 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 TMEM272A0A1B0GTI8 110 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 HMX3A6NHT5 357 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 OR11H12B2RN74 326 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 OR2J3O76001 311 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 OR2C1O95371 312 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 CRYZL1O95825 349 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 IGHV3-23P01764 117 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 RPS25P62851 125 aaKnown RBP6.97□□□□□ -1.29
CNOT9-202ENST00000295701 ATP5G2Q06055 141 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 SPHARQ15513 63 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 MED22Q15528 200 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 RAB11BQ15907 218 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 GUCA2BQ16661 112 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 RNLSQ5VYX0 342 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.97□□□□□ -1.29
CNOT9-202ENST00000295701 OR4A4PQ8NGN8 299 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 OR2K2Q8NGT1 345 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 CACNG8Q8WXS5 425 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 ACOT12Q8WYK0 555 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 DDB2Q92466 427 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 CABLES2Q9BTV7 478 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 MND1Q9BWT6 205 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 ZNF430Q9H8G1 570 aaPredicted RBP6.97□□□□□ -1.29
CNOT9-202ENST00000295701 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 ELF5Q9UKW6 265 aaPredicted RBP6.97□□□□□ -1.29
CNOT9-202ENST00000295701 S4R3C0 116 aa6.97□□□□□ -1.29
CNOT9-202ENST00000295701 A0A075B6Q4 140 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.96□□□□□ -1.3
CNOT9-202ENST00000295701 A0A0B4J203 849 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 C2orf70A6NJV1 201 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 E7EUB6 86 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 MPPED1O15442 326 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 DENRO43583 198 aaKnown RBP6.96□□□□□ -1.3
CNOT9-202ENST00000295701 FCGR3AP08637 254 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 FOLR2P14207 255 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 GNB3P16520 340 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
CNOT9-202ENST00000295701 KIR2DS2P43631 304 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 UBE2KP61086 200 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 EWSR1Q01844 656 aaKnown RBP eCLIP6.96□□□□□ -1.3
CNOT9-202ENST00000295701 KIR3DS1Q14943 382 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 RTL8BQ17RB0 113 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 HES5Q5TA89 166 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 PACRGLQ8N7B6 248 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 TEX45Q8NA69 505 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 OR10J5Q8NHC4 309 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 IL17DQ8TAD2 202 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 DYNLRB2Q8TF09 96 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 FAM3DQ96BQ1 224 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 C20orf173Q96LM9 149 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 SLC2A8Q9NY64 477 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 PRR13Q9NZ81 148 aa6.96□□□□□ -1.3
CNOT9-202ENST00000295701 RBM7Q9Y580 266 aaKnown RBP6.96□□□□□ -1.3
CNOT9-202ENST00000295701 AIREO43918 545 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 NDUFB8O95169 186 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 HSMCR30P0CW71 290 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 SAA1P0DJI8 122 aaPredicted RBP6.95□□□□□ -1.3
CNOT9-202ENST00000295701 MYOD1P15172 320 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 SERPINB10P48595 397 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 RPL30P62888 115 aaKnown RBP6.95□□□□□ -1.3
CNOT9-202ENST00000295701 IRF3Q14653 427 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 RCN1Q15293 331 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 VMA21Q3ZAQ7 101 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 OR2B11Q5JQS5 317 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 KRTAP5-3Q6L8H2 238 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 TTC9CQ8N5M4 171 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 OR56B1Q8NGI3 324 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
CNOT9-202ENST00000295701 UFD1Q92890 307 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms