RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 GAB2Q9UQC2 676 aa12.22□□□□□ -0.45
CCDC140-201ENST00000295226 TEP1Q99973 2627 aaKnown RBP12.21□□□□□ -0.45
CCDC140-201ENST00000295226 IGHV1-3A0A0C4DH29 117 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.45
CCDC140-201ENST00000295226 A0A1W2PPI3 338 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 IFNA21P01568 189 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
CCDC140-201ENST00000295226 LYL1P12980 280 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 DUTP33316 252 aaKnown RBP12.21□□□□□ -0.45
CCDC140-201ENST00000295226 CEACAM3P40198 252 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 DEFB112Q30KQ8 113 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 FBLN7Q53RD9 439 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 TBC1D26Q86UD7 250 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 MALSU1Q96EH3 234 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 NABP2Q9BQ15 211 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 SLC25A32Q9H2D1 315 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 ZFP57Q9NU63 452 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 FAM96BQ9Y3D0 163 aa12.21□□□□□ -0.45
CCDC140-201ENST00000295226 TIMM23O14925 209 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 ANKRD55Q3KP44 614 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 LRRC37A5PQ49AS3 106 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 PRSS54Q6PEW0 395 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 CMTM1Q8IZ96 169 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
CCDC140-201ENST00000295226 AKR1E2Q96JD6 320 aa12.2□□□□□ -0.46
CCDC140-201ENST00000295226 PIGBOS1A0A0B4J2F0 54 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 MPPED1O15442 326 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 BRWD1-AS2P59051 145 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 SRPXP78539 464 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF816Q0VGE8 651 aaPredicted RBP12.19□□□□□ -0.46
CCDC140-201ENST00000295226 SP6Q3SY56 376 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 COMMD7Q86VX2 200 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 LRTM2Q8N967 370 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 FAM216AQ8WUB2 273 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 ST8SIA2Q92186 375 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
CCDC140-201ENST00000295226 ARPC5LQ9BPX5 153 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 NAA60Q9H7X0 242 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 MBD2Q9UBB5 411 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 FN1P02751 2386 aaKnown RBP12.19□□□□□ -0.46
CCDC140-201ENST00000295226 RNF222A6NCQ9 220 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 HNF1AP20823 631 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 THOC7Q6I9Y2 204 aaKnown RBP12.19□□□□□ -0.46
CCDC140-201ENST00000295226 ZBTB34Q8NCN2 500 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 PFDN2Q9UHV9 154 aa12.19□□□□□ -0.46
CCDC140-201ENST00000295226 NSD1Q96L73 2696 aaPredicted RBP12.18□□□□□ -0.46
CCDC140-201ENST00000295226 H0YJW9 148 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 RAMP3O60896 148 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 NMBP08949 121 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 IL15RAQ13261 267 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 LRRC20Q8TCA0 184 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 CFHR4Q92496 578 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 DCUN1D4Q92564 292 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 RITA1Q96K30 269 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 TP53RKQ96S44 253 aa12.18□□□□□ -0.46
CCDC140-201ENST00000295226 HSD17B10Q99714 261 aaKnown RBP12.18□□□□□ -0.46
CCDC140-201ENST00000295226 FCGR3BO75015 233 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 ADAP1O75689 374 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 FBP1P09467 338 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 THBS3P49746 956 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 BPIFB3P59826 476 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 RND3P61587 244 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 EIF5AP63241 154 aaKnown RBP12.17□□□□□ -0.46
CCDC140-201ENST00000295226 HNF4GQ14541 408 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 MSMO1Q15800 293 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 FAM71F2Q6NXP2 309 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 ALKAL2Q6UX46 152 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF66Q6ZN08 573 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 STOML3Q8TAV4 291 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 DDB2Q92466 427 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 SSX3Q99909 188 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 MEGF9Q9H1U4 602 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
CCDC140-201ENST00000295226 H7C2Y5 167 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SPDEFO95238 335 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 RLN2P04090 185 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 IGKV1-16P04430 117 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 OR5AC1P0C628 307 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 F2RP25116 425 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 S100GP29377 79 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SMCO1Q147U7 214 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SPAG16Q8N0X2 631 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 LGI3Q8N145 548 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 AQP10Q96PS8 301 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 ZNF471Q9BX82 626 aaPredicted RBP12.16□□□□□ -0.46
CCDC140-201ENST00000295226 SLC35D1Q9NTN3 355 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 CUBNO60494 3623 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 C3orf85A0A1B0GTC6 90 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 OOSP1A8MZH6 123 aa12.16□□□□□ -0.46
CCDC140-201ENST00000295226 TAAR5O14804 337 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms