RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 DDB2Q92466 427 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
PDPN-201ENST00000294489 NKX6-2Q9C056 277 aaPredicted RBP7.51□□□□□ -1.21
PDPN-201ENST00000294489 EIF5A2Q9GZV4 153 aaKnown RBP7.51□□□□□ -1.21
PDPN-201ENST00000294489 CTSZQ9UBR2 303 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 FBXO7Q9Y3I1 522 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 BTBD17A6NE02 478 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 C19orf84I3L1E1 186 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 MMP23AO75900 390 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 SCAF4O95104 1147 aaKnown RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 OR8U8P0C7N1 319 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 OR9G9P0C7N8 305 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 ADCYAP1P18509 176 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 DLX6P56179 175 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 ZNF273Q14593 569 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 GUK1Q16774 197 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 UTF1Q5T230 341 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 LYPD2Q6UXB3 125 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 OR10P1Q8NGE3 313 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 ZNF596Q8TC21 504 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 QTRT1Q9BXR0 403 aaKnown RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 PARD6GQ9BYG4 376 aaPredicted RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 RFNGQ9Y644 331 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 USF3Q68DE3 2245 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 ROS1P08922 2347 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 A0A1W2PPR1 153 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 COL8A2P25067 703 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 OR2B8PP59922 312 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 SPCS3P61009 180 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 B2MP61769 119 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 RPP30P78346 268 aaKnown RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 LRRC75BQ2VPJ9 315 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 TMEM200BQ69YZ2 307 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 HAPLN4Q86UW8 402 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 C8orf31Q8N9H6 132 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 OR52E5Q8NH55 327 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 NEU4Q8WWR8 484 aaPredicted RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 ZNF251Q9BRH9 671 aa7.5□□□□□ -1.21
PDPN-201ENST00000294489 PSMG3Q9BT73 122 aaPredicted RBP7.5□□□□□ -1.21
PDPN-201ENST00000294489 DVL1O14640 695 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 SNAPINO95295 136 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 SERF2P84101 59 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 AARDQ4LEZ3 155 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 ATRAIDQ6UW56 229 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 OR4C12Q96R67 309 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 WDR61Q9GZS3 305 aaKnown RBP7.49□□□□□ -1.21
PDPN-201ENST00000294489 TMEM140Q9NV12 185 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 PPIHO43447 177 aaKnown RBP7.49□□□□□ -1.21
PDPN-201ENST00000294489 HRASP01112 189 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 HBE1P02100 147 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 SOD3P08294 240 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 CCL3L1P16619 93 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 RTL8BQ17RB0 113 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 ZNF841Q6ZN19 808 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 C1orf229Q6ZS94 237 aaPredicted RBP7.49□□□□□ -1.21
PDPN-201ENST00000294489 VKORC1L1Q8N0U8 176 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 ZNF383Q8NA42 475 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 RHOVQ96L33 236 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 RSG1Q9BU20 258 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 RAB1BQ9H0U4 201 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 HIPK2Q9H2X6 1198 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 HRNRQ86YZ3 2850 aaPredicted RBP7.49□□□□□ -1.21
PDPN-201ENST00000294489 UBE2L5PA0A1B0GUS4 154 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 A0A1B0GV50 99 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 PPT1P50897 306 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 GUCA2BQ16661 112 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 SPINK9Q5DT21 86 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 PUSL1Q8N0Z8 303 aaKnown RBP7.49□□□□□ -1.21
PDPN-201ENST00000294489 TAF15Q92804 592 aaKnown RBP eCLIP7.49□□□□□ -1.21
PDPN-201ENST00000294489 TMEM147Q9BVK8 224 aa7.49□□□□□ -1.21
PDPN-201ENST00000294489 HIVEP3Q5T1R4 2406 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 A0A087X0M5 115 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 A0A1B0GX30 115 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 GPR37O15354 613 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 RELBQ01201 579 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 DHRS7BQ6IAN0 325 aaPredicted RBP7.48□□□□□ -1.21
PDPN-201ENST00000294489 ZNF429Q86V71 674 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 C8orf46Q8TAG6 207 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 SFT2D1Q8WV19 159 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 IGFBPL1Q8WX77 278 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 AIFM2Q9BRQ8 373 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 SMDT1Q9H4I9 107 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 HEYLQ9NQ87 328 aaPredicted RBP7.48□□□□□ -1.21
PDPN-201ENST00000294489 KPTNQ9Y664 436 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 RELNP78509 3460 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 A0A1B0GW64 132 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 GNB2P62879 340 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 RBMXL1Q96E39 390 aaKnown RBP7.48□□□□□ -1.21
PDPN-201ENST00000294489 BBC3Q96PG8 261 aaPredicted RBP7.48□□□□□ -1.21
PDPN-201ENST00000294489 SLC35D1Q9NTN3 355 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 IGSF10Q6WRI0 2623 aa7.48□□□□□ -1.21
PDPN-201ENST00000294489 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 A6NNC1 897 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 C9JQL5 133 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 TSPAN4O14817 238 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms