RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 FAM216BQ8N7L0 139 aa13.09□□□□□ -0.31
NCKIPSD-201ENST00000294129 CA5BP1Q8WTZ4 195 aa13.09□□□□□ -0.31
NCKIPSD-201ENST00000294129 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
NCKIPSD-201ENST00000294129 PINX1Q96BK5 328 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-201ENST00000294129 CISD1Q9NZ45 108 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-201ENST00000294129 CYB5BO43169 146 aa13.08□□□□□ -0.31
NCKIPSD-201ENST00000294129 SDSLQ96GA7 329 aa13.08□□□□□ -0.31
NCKIPSD-201ENST00000294129 S1PR3Q99500 378 aa13.08□□□□□ -0.31
NCKIPSD-201ENST00000294129 PMS2P5A8MQ11 134 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 SELENOVP59797 346 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 OR5T1Q8NG75 326 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 VAX2Q9UIW0 290 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 ABCA4P78363 2273 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 MDKP21741 143 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 LOXL3P58215 753 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 ERVK-16P61578 105 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 NKX6-1P78426 367 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 ELOBQ15370 118 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 ADIRFQ15847 76 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 FAM90A1Q86YD7 464 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 ABHD12Q8N2K0 398 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 CISD2Q8N5K1 135 aaKnown RBP13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 YPEL4Q96NS1 127 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 SSX3Q99909 188 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 IFI27L2Q9H2X8 130 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 JPT1Q9UK76 154 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 LAMP3Q9UQV4 416 aa13.08□□□□□ -0.32
NCKIPSD-201ENST00000294129 DSCAML1Q8TD84 2053 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 C15orf62A8K5M9 175 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 OPN1MWP04001 364 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 OPN1MW2P0DN77 364 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 OPN1MW3P0DN78 364 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 C9orf152Q5JTZ5 239 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 TRAT1Q6PIZ9 186 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 IGFL3Q6UXB1 125 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 MRGPRGQ86SM5 289 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 CIB3Q96Q77 187 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 OR6C3Q9NZP0 311 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 IFITM10A6NMD0 228 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 IFNA1P01562 189 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 MYOD1P15172 320 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 CLEC12BQ2HXU8 276 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 NECAP1Q8NC96 275 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 PRSS33Q8NF86 280 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 RAB24Q969Q5 203 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 SMIM7Q9BQ49 75 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 DOK5Q9P104 306 aa13.07□□□□□ -0.32
NCKIPSD-201ENST00000294129 TRAV38-1A0A0B4J264 116 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 RRHO14718 337 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 SOX15O60248 233 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 PYY3Q5JQD4 70 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 SLC35E3Q7Z769 313 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 OR4F5Q8NH21 305 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 OR4F4Q96R69 305 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 HPRT1P00492 218 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 CRYABP02511 175 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 HOXA5P20719 270 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 CD40P25942 277 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 UBE2G2P60604 165 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 C1QL4Q86Z23 238 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 PATZ1Q9HBE1 687 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 TMEM140Q9NV12 185 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 TANC2Q9HCD6 1990 aa13.06□□□□□ -0.32
NCKIPSD-201ENST00000294129 IGF2RP11717 2491 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 COL8A2P25067 703 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 CD81P60033 236 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 C4orf17Q53FE4 359 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 CT45A1Q5HYN5 189 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 CT45A3Q8NHU0 189 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 ABHD17AQ96GS6 310 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 PTPRQQ9UMZ3 2332 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 SAA2-SAA4A0A096LPE2 208 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 A8MXE2 369 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 TMPRSS2O15393 492 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 YPEL1O60688 119 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 MMP23AO75900 390 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 SAA2P0DJI9 122 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 NDUFB7P17568 137 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 C17orf58Q2M2W7 97 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 IGF2-ASQ6U949 168 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 FAM169BQ8N8A8 192 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 YPEL2Q96QA6 119 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 PAGE4O60829 102 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 CCKARP32238 428 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 MAS1LP35410 378 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 ATP6V1FQ16864 119 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 C1orf174Q8IYL3 243 aa13.05□□□□□ -0.32
NCKIPSD-201ENST00000294129 TRGV10A0A0A0MS01 117 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 CTXND1A0A1B0GTU2 59 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 CD1BP29016 333 aa13.04□□□□□ -0.32
NCKIPSD-201ENST00000294129 TIMP3P35625 211 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms