RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 VBP1P61758 197 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 RPL30P62888 115 aaKnown RBP7.57□□□□□ -1.2
CCDC58-201ENST00000291458 SSBP2P81877 361 aaPredicted RBP7.57□□□□□ -1.2
CCDC58-201ENST00000291458 DGCR2P98153 550 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 TMEM177Q53S58 311 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 UBE2NLQ5JXB2 153 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 C9orf66Q5T8R8 295 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 ZNF562Q6V9R5 426 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 Q6ZS49 121 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 SSX9Q7RTT3 188 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 HAPLN4Q86UW8 402 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 OR13F1Q8NGS4 319 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 DDB2Q92466 427 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 DCUN1D4Q92564 292 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 ADTRPQ96IZ2 230 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 RNF5Q99942 180 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 FUNDC2Q9BWH2 189 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 NAA50Q9GZZ1 169 aaKnown RBP7.57□□□□□ -1.2
CCDC58-201ENST00000291458 DCSTAMPQ9H295 470 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 AUNIPQ9H7T9 357 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 CCL28Q9NRJ3 127 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 NUBP2Q9Y5Y2 271 aa7.57□□□□□ -1.2
CCDC58-201ENST00000291458 C13orf42A0A1B0GVH6 325 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 LINC01619G3V211 115 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 OVOL1O14753 267 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 SAP30O75446 220 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 PRH1P02810 166 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 EIF4EP06730 217 aaKnown RBP7.56□□□□□ -1.2
CCDC58-201ENST00000291458 CRYGBP07316 175 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 CTXN2P0C2S0 81 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 CD40LGP29965 261 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 CRIP2P52943 208 aaPredicted RBP7.56□□□□□ -1.2
CCDC58-201ENST00000291458 TAS2R20P59543 309 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 EGFEM1PQ0D2K5 195 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 FHL3Q13643 280 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 SRSF7Q16629 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC58-201ENST00000291458 TMEM69Q5SWH9 247 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 C11orf87Q6NUJ2 197 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 C19orf35Q6ZS72 473 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 TCTEX1D1Q8N7M0 179 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 POC5Q8NA72 575 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 MISP3Q96FF7 219 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 SLC5A7Q9GZV3 580 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 EHFQ9NZC4 300 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 COMMD3Q9UBI1 195 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 MRPS7Q9Y2R9 242 aaKnown RBP7.56□□□□□ -1.2
CCDC58-201ENST00000291458 PRELID3BQ9Y3B1 194 aa7.56□□□□□ -1.2
CCDC58-201ENST00000291458 MSGN1A6NI15 193 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 PPYP01298 95 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 IGLV2-14P01704 120 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 HLA-DQB1P01920 261 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 PMP2P02689 132 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 SMIM18P0DKX4 95 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 RPA2P15927 270 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 LGALS7P47929 136 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 SCAND1P57086 179 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 UBE2KP61086 200 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 HERV-K104P61576 105 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 CD69Q07108 199 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 PRSS8Q16651 343 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 PYHIN1Q6K0P9 492 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 HOGA1Q86XE5 327 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 OR51H1Q8NH63 302 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 OR4S2Q8NH73 311 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 SRSF12Q8WXF0 261 aaKnown RBP7.55□□□□□ -1.2
CCDC58-201ENST00000291458 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
CCDC58-201ENST00000291458 S100A16Q96FQ6 103 aaKnown RBP7.55□□□□□ -1.2
CCDC58-201ENST00000291458 TINAGL1Q9GZM7 467 aaPredicted RBP7.55□□□□□ -1.2
CCDC58-201ENST00000291458 ZNF430Q9H8G1 570 aaPredicted RBP7.55□□□□□ -1.2
CCDC58-201ENST00000291458 TNCP24821 2201 aa7.55□□□□□ -1.2
CCDC58-201ENST00000291458 TGP01266 2768 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 HMX3A6NHT5 357 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 FAM25AB3EWG3 89 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 FAM25CB3EWG5 89 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 FAM25GB3EWG6 89 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 SULT1C2O00338 296 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 XRCC3O43542 346 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 HPGDSO60760 199 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 RAMP3O60896 148 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 ACTL6BO94805 426 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 MYOD1P15172 320 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 RUNX1Q01196 453 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 CDK10Q15131 360 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 MRGPRG-AS1Q2M3A8 158 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 AKIRIN2Q53H80 203 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 AADACL3Q5VUY0 350 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 SNX29P2Q8IUI4 249 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 CROCCP3Q8IVE0 287 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 OSR1Q8TAX0 266 aaPredicted RBP7.54□□□□□ -1.2
CCDC58-201ENST00000291458 FYTTD1Q96QD9 318 aaKnown RBP7.54□□□□□ -1.2
CCDC58-201ENST00000291458 SLA2Q9H6Q3 261 aa7.54□□□□□ -1.2
CCDC58-201ENST00000291458 A0A0A6YYH2 397 aa7.53□□□□□ -1.2
CCDC58-201ENST00000291458 A6NJ64 397 aa7.53□□□□□ -1.2
CCDC58-201ENST00000291458 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
CCDC58-201ENST00000291458 TRBV12-3P01733 135 aa7.53□□□□□ -1.2
CCDC58-201ENST00000291458 RLN1P04808 185 aa7.53□□□□□ -1.2
CCDC58-201ENST00000291458 REG1AP05451 166 aa7.53□□□□□ -1.2
CCDC58-201ENST00000291458 HLA-DMAP28067 261 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms