RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.69
TPM1-202ENST00000288398 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 SHISA3A0PJX4 238 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 TPPPO94811 219 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 TRBV12-3P01733 135 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 CSN3P07498 182 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 SAA1P0DJI8 122 aaPredicted RBP10.7□□□□□ -0.7
TPM1-202ENST00000288398 GNG2P59768 71 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 SSX1Q16384 188 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 CDNFQ49AH0 187 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 OR2B11Q5JQS5 317 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 C22orf42Q6IC83 251 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 IZUMO2Q6UXV1 221 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 Q6ZS49 121 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 NECAP1Q8NC96 275 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 VSTM2AQ8TAG5 236 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 DDB2Q92466 427 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 C5orf30Q96GV9 206 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 ZNF430Q9H8G1 570 aaPredicted RBP10.7□□□□□ -0.7
TPM1-202ENST00000288398 AKIP1Q9NQ31 210 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 OR2W1Q9Y3N9 320 aa10.7□□□□□ -0.7
TPM1-202ENST00000288398 LINC00473A8K010 186 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 DHFRP00374 187 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 PRH1P02810 166 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 GALP22466 123 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 CD81P60033 236 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 HAGHQ16775 308 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 HACD4Q5VWC8 232 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 IL34Q6ZMJ4 242 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 OR4S2Q8NH73 311 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 TCTEX1D2Q8WW35 142 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
TPM1-202ENST00000288398 DCSTAMPQ9H295 470 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 ADAM30Q9UKF2 790 aa10.69□□□□□ -0.7
TPM1-202ENST00000288398 LCE6AA0A183 80 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 SMIM30A4D0T7 59 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 OR2J3O76001 311 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 NFYAP23511 347 aaPredicted RBP10.68□□□□□ -0.7
TPM1-202ENST00000288398 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 C15orf32Q32M92 178 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 LAX1Q8IWV1 398 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 TTC9CQ8N5M4 171 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 FYTTD1Q96QD9 318 aaKnown RBP10.68□□□□□ -0.7
TPM1-202ENST00000288398 HSD17B10Q99714 261 aaKnown RBP10.68□□□□□ -0.7
TPM1-202ENST00000288398 OR51E2Q9H255 320 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 PLEKHA3Q9HB20 300 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 RBMX2Q9Y388 322 aaKnown RBP10.68□□□□□ -0.7
TPM1-202ENST00000288398 CEPT1Q9Y6K0 416 aa10.68□□□□□ -0.7
TPM1-202ENST00000288398 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.67□□□□□ -0.7
TPM1-202ENST00000288398 NOTOA8MTQ0 251 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 BMPR1BO00238 502 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 GGCTO75223 188 aaKnown RBP10.67□□□□□ -0.7
TPM1-202ENST00000288398 PSMB9P28065 219 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 ARPC4P59998 168 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 CNIH2Q6PI25 160 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 NUDCD2Q8WVJ2 157 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 OR2A7Q96R45 310 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 NEURL2Q9BR09 285 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 AIFM2Q9BRQ8 373 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 DAPK2Q9UIK4 370 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 SPATA2Q9UM82 520 aa10.67□□□□□ -0.7
TPM1-202ENST00000288398 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
TPM1-202ENST00000288398 IGKV1D-8A0A087WSZ0 117 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 MRPS14O60783 128 aaKnown RBP10.66□□□□□ -0.7
TPM1-202ENST00000288398 HRASP01112 189 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 HLA-DQB1P01920 261 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 DEFA4P12838 97 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 MAS1LP35410 378 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 KIR2DS2P43631 304 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
TPM1-202ENST00000288398 GABARAPL2P60520 117 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
TPM1-202ENST00000288398 C10orf55Q5SWW7 151 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 TPRA1Q86W33 373 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 VKORC1L1Q8N0U8 176 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 TECRQ9NZ01 308 aaKnown RBP10.66□□□□□ -0.7
TPM1-202ENST00000288398 FBXL7Q9UJT9 491 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 ELF5Q9UKW6 265 aaPredicted RBP10.66□□□□□ -0.7
TPM1-202ENST00000288398 SSR3Q9UNL2 185 aa10.66□□□□□ -0.7
TPM1-202ENST00000288398 TRBV9A0A0B4J1U6 114 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 IZUMO1RA6ND01 250 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 TMEM235A6NFC5 223 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 JTBO76095 146 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 KBTBD11O94819 623 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 HIST1H1BP16401 226 aaKnown RBP10.65□□□□□ -0.7
TPM1-202ENST00000288398 ZNF45Q02386 682 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 MRGPRG-AS1Q2M3A8 158 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 FAM106AQ4KMX7 169 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 ZNF66Q6ZN08 573 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 FCGR1BQ92637 280 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 Q9H521 79 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 ANXA10Q9UJ72 324 aa10.65□□□□□ -0.7
TPM1-202ENST00000288398 RAB26Q9ULW5 256 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms