RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 AURKAIP1Q9NWT8 199 aaPredicted RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 PAM16Q9Y3D7 125 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ZNF407Q9C0G0 2248 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ICE1Q9Y2F5 2266 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ZNF891A8MT65 544 aaPredicted RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 ZNHIT1O43257 154 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 PAGE4O60829 102 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 OR2H2O95918 312 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 IGHV3-9P01782 118 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 GNG10P50151 68 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 RAB7AP51149 207 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 AARDQ4LEZ3 155 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 WDR31Q8NA23 367 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 OR5T1Q8NG75 326 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ELOVL5Q9NYP7 299 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 PLA2G3Q9NZ20 509 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 SPTBN1Q01082 2364 aaKnown RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 TCF21O43680 179 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 CCL2P13500 99 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 COX5AP20674 150 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 CCNOP22674 350 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ADMP35318 185 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 FOXG1P55316 489 aaPredicted RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 FGFRL1Q8N441 504 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 ZNF488Q96MN9 340 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 CIB3Q96Q77 187 aaPredicted RBP8.7□□□□□ -1.02
SKA1-201ENST00000285116 CHODLQ9H9P2 273 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 MSL2Q9HCI7 577 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 DNAJC4Q9NNZ3 241 aa8.7□□□□□ -1.02
SKA1-201ENST00000285116 DOCK10Q96BY6 2186 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 A0A1W2PR80 420 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 PDE6DO43924 150 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 NPPCP23582 126 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 ATP1A1-AS1Q5TC04 95 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 TIPARPQ7Z3E1 657 aaKnown RBP8.69□□□□□ -1.02
SKA1-201ENST00000285116 C11orf42Q8N5U0 333 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 TTTY12Q9BZ98 90 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 ZDHHC11Q9H8X9 412 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 PRR14LQ5THK1 2151 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 SH2D1BO14796 132 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 RHBDL1O75783 438 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 CD33P20138 364 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 ZNF766Q5HY98 468 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 SLC35E4Q6ICL7 350 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 OR8G2PQ6IF36 304 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 WDR86Q86TI4 376 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 SGMS2Q8NHU3 365 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 HSPB9Q9BQS6 159 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 PATZ1Q9HBE1 687 aaKnown RBP8.69□□□□□ -1.02
SKA1-201ENST00000285116 ABI3Q9P2A4 366 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 PPP1R3CQ9UQK1 317 aa8.69□□□□□ -1.02
SKA1-201ENST00000285116 LRRC30A6NM36 301 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 RAB29O14966 203 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
SKA1-201ENST00000285116 KRASP01116 189 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 ZNF883P0CG24 379 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 CHRNB4P30926 498 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 COTL1Q14019 142 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 FFAR4Q5NUL3 377 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 LRP11Q86VZ4 500 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 SCCPDHQ8NBX0 429 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 OR5AU1Q8NGC0 362 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 OR4B1Q8NGF8 309 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 VN1R17PQ8TDU5 208 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 SLC35E1Q96K37 410 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.68□□□□□ -1.02
SKA1-201ENST00000285116 KCNIP1Q9NZI2 227 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 TRAPPC2LQ9UL33 140 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 TP53TG3Q9ULZ0 132 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 FAM90A9PA6NNJ1 464 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 SAPCD1Q5SSQ6 148 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 SPINK14Q6IE38 97 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 RAB1CQ92928 201 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 LOXL2Q9Y4K0 774 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 BSNQ9UPA5 3926 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 ESPL1Q14674 2120 aa8.68□□□□□ -1.02
SKA1-201ENST00000285116 TMEM30CPA0ZSE6 113 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 GRIFINA4D1Z8 144 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 IQCF6A8MYZ5 107 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 C21orf140B9A014 251 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CDX4O14627 284 aaPredicted RBP8.67□□□□□ -1.02
SKA1-201ENST00000285116 CLDN14O95500 239 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CELA3AP09093 270 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CRISP2P16562 243 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CA6P23280 308 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TFPI2P48307 235 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 IGFBP7Q16270 282 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 ABHD17BQ5VST6 288 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 IL1F10Q8WWZ1 152 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 SFRP2Q96HF1 295 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 LRFN3Q9BTN0 628 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 MDFIC2A0A1B0GVS7 189 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 SERF1AO75920 110 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CLDN1O95832 211 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 MT-CO3P00414 261 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 RAC2P15153 192 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CDKN1AP38936 164 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 LINC00310P59036 64 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms