RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 UNQ6494/PRO21346Q6UXR6 183 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 SLC25A48Q6ZT89 311 aaKnown RBP18.96■□□□□ 0.63
RAB40B-201ENST00000269347 S1PR3Q99500 378 aa18.96■□□□□ 0.63
RAB40B-201ENST00000269347 EIF5A2Q9GZV4 153 aaKnown RBP18.96■□□□□ 0.63
RAB40B-201ENST00000269347 DVL1O14640 695 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 LY6HO94772 140 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 SLC38A11Q08AI6 406 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 DIAPH2-AS1Q14236 149 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 H1FXQ92522 213 aaKnown RBP18.95■□□□□ 0.62
RAB40B-201ENST00000269347 GAB2Q9UQC2 676 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 MALRD1Q5VYJ5 2156 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 IGHV1-69-2A0A0G2JMI3 117 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 hADV38S2A0JD32 116 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 CT45A6P0DMU7 189 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 CT45A5P0DMU8 189 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 CT45A7P0DMV0 189 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 ZNF726P1Q15940 193 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 LRRC75BQ2VPJ9 315 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 CD300LFQ8TDQ1 290 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 AIFM2Q9BRQ8 373 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 MS4A5Q9H3V2 200 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 TMEM140Q9NV12 185 aa18.95■□□□□ 0.62
RAB40B-201ENST00000269347 COL12A1Q99715 3063 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 ARHGAP32A7KAX9 2087 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 UBE2L5PA0A1B0GUS4 154 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 B9A039 149 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 DFFBO76075 338 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 IGKV1-16P04430 117 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 RAB7AP51149 207 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 PRB3Q04118 309 aaPredicted RBP18.94■□□□□ 0.62
RAB40B-201ENST00000269347 MUC15Q8N387 334 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 CSMD1Q96PZ7 3565 aa18.94■□□□□ 0.62
RAB40B-201ENST00000269347 C15orf62A8K5M9 175 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 FLI1Q01543 452 aaPredicted RBP18.93■□□□□ 0.62
RAB40B-201ENST00000269347 AARDQ4LEZ3 155 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 ETV3LQ6ZN32 361 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 C1orf87Q8N0U7 546 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 LILRB2Q8N423 598 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 GNPNAT1Q96EK6 184 aaPredicted RBP18.93■□□□□ 0.62
RAB40B-201ENST00000269347 WDR61Q9GZS3 305 aaKnown RBP18.93■□□□□ 0.62
RAB40B-201ENST00000269347 RPRMQ9NS64 109 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 CFAP46Q8IYW2 2715 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 SRRM4A7MD48 611 aaKnown RBP18.93■□□□□ 0.62
RAB40B-201ENST00000269347 CEBPZOSA8MTT3 80 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 RBFOX2O43251 390 aaKnown RBP eCLIP18.93■□□□□ 0.62
RAB40B-201ENST00000269347 CA5BP1Q8WTZ4 195 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 TMEM170AQ8WVE7 144 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 PBDC1Q9BVG4 233 aa18.93■□□□□ 0.62
RAB40B-201ENST00000269347 UMAD1C9J7I0 102 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 TSPAN9O75954 239 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 ZNF672Q499Z4 452 aaPredicted RBP18.92■□□□□ 0.62
RAB40B-201ENST00000269347 LFNGQ8NES3 379 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 LAMP3Q9UQV4 416 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 IFNA5P01569 189 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 IGKV1D-33P01593 117 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 IGKV1-33P01594 117 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 DLX6P56179 175 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 SLC25A24Q6NUK1 477 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 ZNF714Q96N38 554 aa18.92■□□□□ 0.62
RAB40B-201ENST00000269347 VSTM5A8MXK1 200 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 AKIRIN2Q53H80 203 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 C11orf42Q8N5U0 333 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 MLXQ9UH92 298 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 PRELID3BQ9Y3B1 194 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 NQO2P16083 231 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 HEPN1Q6WQI6 88 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 FAM216AQ8WUB2 273 aa18.91■□□□□ 0.62
RAB40B-201ENST00000269347 A0A1W2PPR1 153 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 IFNA17P01571 189 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 REG1BP48304 166 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 HBG1P69891 147 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 HBG2P69892 147 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 MEF2CQ06413 473 aaPredicted RBP18.9■□□□□ 0.62
RAB40B-201ENST00000269347 OR4A47Q6IF82 309 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.9■□□□□ 0.62
RAB40B-201ENST00000269347 TAF15Q92804 592 aaKnown RBP eCLIP18.9■□□□□ 0.62
RAB40B-201ENST00000269347 RHOVQ96L33 236 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 TMEM204Q9BSN7 226 aa18.9■□□□□ 0.62
RAB40B-201ENST00000269347 VPS13CQ709C8 3753 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 NDUFB3O43676 98 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 FBP1P09467 338 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 VDAC2P45880 294 aaPredicted RBP18.89■□□□□ 0.62
RAB40B-201ENST00000269347 UQCRFS1P47985 274 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 AKR1C8PQ5T2L2 129 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 PRELID1Q9Y255 219 aa18.89■□□□□ 0.62
RAB40B-201ENST00000269347 RRHO14718 337 aa18.89■□□□□ 0.61
RAB40B-201ENST00000269347 OR4S2Q8NH73 311 aa18.89■□□□□ 0.61
RAB40B-201ENST00000269347 SFT2D1Q8WV19 159 aa18.89■□□□□ 0.61
RAB40B-201ENST00000269347 MRPL20Q9BYC9 149 aaKnown RBP18.89■□□□□ 0.61
RAB40B-201ENST00000269347 THBS3P49746 956 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 ELLP55199 621 aaPredicted RBP18.88■□□□□ 0.61
RAB40B-201ENST00000269347 ACSM6Q6P461 480 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 ABHD12Q8N2K0 398 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 OR4A16Q8NH70 328 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 KAAG1Q9UBP8 84 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 PLXNB1O43157 2135 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 ARG1P05089 322 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 DEFA4P12838 97 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 AVPI1Q5T686 147 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 Q8N7P7 452 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms