RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 GUCD1Q96NT3 240 aa18.42■□□□□ 0.54
CDR2-201ENST00000268383 OR6C3Q9NZP0 311 aa18.42■□□□□ 0.54
CDR2-201ENST00000268383 CD1BP29016 333 aa18.41■□□□□ 0.54
CDR2-201ENST00000268383 MRPL37Q9BZE1 423 aaKnown RBP18.41■□□□□ 0.54
CDR2-201ENST00000268383 IFNA10P01566 189 aa18.41■□□□□ 0.54
CDR2-201ENST00000268383 SOX8P57073 446 aa18.41■□□□□ 0.54
CDR2-201ENST00000268383 REC114Q7Z4M0 266 aa18.41■□□□□ 0.54
CDR2-201ENST00000268383 LEAP2Q969E1 77 aa18.41■□□□□ 0.54
CDR2-201ENST00000268383 EP300Q09472 2414 aaPredicted RBP18.41■□□□□ 0.54
CDR2-201ENST00000268383 TMEM210A6NLX4 147 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 CD59P13987 128 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 LINC01551Q86U37 167 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 ABHD12Q8N2K0 398 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 TMEM170AQ8WVE7 144 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 CEP250Q9BV73 2442 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 IGHV3OR15-7A0A075B7D8 119 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 IL3RAP26951 378 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 TCF23Q7RTU1 214 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 ARFGEF3Q5TH69 2177 aa18.4■□□□□ 0.54
CDR2-201ENST00000268383 NDUFB7P17568 137 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 VWC2Q2TAL6 325 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 ACOT6Q3I5F7 207 aaPredicted RBP18.39■□□□□ 0.53
CDR2-201ENST00000268383 ACTL10Q5JWF8 245 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 MIC13Q5XKP0 118 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 TGIF2LYQ8IUE0 185 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 TAAR6Q96RI8 345 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 CNOT1A5YKK6 2376 aaKnown RBP18.39■□□□□ 0.53
CDR2-201ENST00000268383 RBFOX2O43251 390 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDR2-201ENST00000268383 SPRNQ5BIV9 151 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 LRRC29Q8WV35 223 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 SSMEM1Q8WWF3 244 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 CIB3Q96Q77 187 aaPredicted RBP18.39■□□□□ 0.53
CDR2-201ENST00000268383 CXXC4Q9H2H0 198 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 GNG12Q9UBI6 72 aa18.39■□□□□ 0.53
CDR2-201ENST00000268383 MGAQ8IWI9 3026 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 TRBV20OR9-2A0A075B6H5 130 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 ZNF320A2RRD8 509 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 DVL1O14640 695 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 GPR12P47775 334 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 PRAMEF5Q5TYX0 476 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 OR5R1Q8NH85 324 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 ANAPC16Q96DE5 110 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 FER1L6-AS2Q96M78 137 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 A0A1W2PPV4 95 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 C17orf112F2Z3M2 114 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 C15orf65H3BRN8 121 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 GGCTO75223 188 aaKnown RBP18.38■□□□□ 0.53
CDR2-201ENST00000268383 CECR9P0C854 216 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 ARL14EPLP0DKL9 152 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 HES3Q5TGS1 186 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 C1orf229Q6ZS94 237 aaPredicted RBP18.38■□□□□ 0.53
CDR2-201ENST00000268383 WDR31Q8NA23 367 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 ZDHHC11Q9H8X9 412 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 WDR83OSQ9Y284 106 aa18.38■□□□□ 0.53
CDR2-201ENST00000268383 M0R1X1 148 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 AQP7O14520 342 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 ROS1P08922 2347 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 DUTP33316 252 aaKnown RBP18.37■□□□□ 0.53
CDR2-201ENST00000268383 ZNF134P52741 427 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 FAM214BQ7L5A3 538 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 MISP3Q96FF7 219 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 HEYLQ9NQ87 328 aaPredicted RBP18.37■□□□□ 0.53
CDR2-201ENST00000268383 PLCE1Q9P212 2302 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.37■□□□□ 0.53
CDR2-201ENST00000268383 NUPR1O60356 82 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 OR4A8P0C604 315 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 TMEM256Q8N2U0 113 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 MS4A5Q9H3V2 200 aa18.37■□□□□ 0.53
CDR2-201ENST00000268383 CDX4O14627 284 aaPredicted RBP18.36■□□□□ 0.53
CDR2-201ENST00000268383 THBS3P49746 956 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 TREML4Q6UXN2 200 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 Q6ZT83 130 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 J3QW42 95 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 INO80CQ6PI98 192 aaPredicted RBP18.36■□□□□ 0.53
CDR2-201ENST00000268383 MRPL41Q8IXM3 137 aaKnown RBP18.36■□□□□ 0.53
CDR2-201ENST00000268383 ZNRF1Q8ND25 227 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 HSD17B10Q99714 261 aaKnown RBP18.36■□□□□ 0.53
CDR2-201ENST00000268383 CLCF1Q9UBD9 225 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 MYOD1P15172 320 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 SSX2Q16385 188 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 LRP11Q86VZ4 500 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 C9orf106Q8NAJ2 232 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 OR2Z1Q8NG97 314 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 MGST2Q99735 147 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 DUSP13Q9UII6 198 aa18.36■□□□□ 0.53
CDR2-201ENST00000268383 YLPM1P49750 1951 aaKnown RBP18.35■□□□□ 0.53
CDR2-201ENST00000268383 SCO2A0A1W2PP80 73 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 SPINT2O43291 252 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 CD33P20138 364 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 PRDX2P32119 198 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 COA6Q5JTJ3 125 aaKnown RBP18.35■□□□□ 0.53
CDR2-201ENST00000268383 SPATA31B1PQ5VZV4 182 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 OR4A16Q8NH70 328 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 RNASEH2CQ8TDP1 164 aaKnown RBP18.35■□□□□ 0.53
CDR2-201ENST00000268383 CACNA1GO43497 2377 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 DSCAMO60469 2012 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 SLC31A2O15432 143 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 IGKV3-15P01624 115 aa18.35■□□□□ 0.53
CDR2-201ENST00000268383 SELLP14151 372 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms