RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 LYRM2Q9NU23 88 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 RALYQ9UKM9 306 aaKnown RBP16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 KMT2BQ9UMN6 2715 aaPredicted RBP16.88■□□□□ 0.29
LYSMD2-201ENST00000267838 TRBV23-1A0A0A0MS06 115 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 SSSCA1O60232 199 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 NXPH3O95157 252 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 TMEM155Q4W5P6 130 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 ZNF841Q6ZN19 808 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 TMEM182Q6ZP80 229 aaPredicted RBP16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 C1orf229Q6ZS94 237 aaPredicted RBP16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 LYG1Q8N1E2 194 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 SFT2D1Q8WV19 159 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 HIST1H2BAQ96A08 127 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 CLCC1Q96S66 551 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 SH3BGRL3Q9H299 93 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 C7orf77A4D0Y5 90 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 M0R036 132 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 PPIHO43447 177 aaKnown RBP16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 KRASP01116 189 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 G6PCP35575 357 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 CDKN1AP38936 164 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 DLX6P56179 175 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 S100A12P80511 92 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 AKIRIN2Q53H80 203 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 FAM213BQ8TBF2 198 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 C12orf57Q99622 126 aa16.87■□□□□ 0.29
LYSMD2-201ENST00000267838 USF3Q68DE3 2245 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 KIAA1324LA8MWY0 1029 aaPredicted RBP16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 WRBO00258 174 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 FCGR3BO75015 233 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 P0C879 139 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 HABP2Q14520 560 aaPredicted RBP16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 RAB39BQ96DA2 213 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 GNPNAT1Q96EK6 184 aaPredicted RBP16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 ZNF251Q9BRH9 671 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 CHODLQ9H9P2 273 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 UNKLQ9H9P5 680 aaKnown RBP16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 MIOXQ9UGB7 285 aa16.86■□□□□ 0.29
LYSMD2-201ENST00000267838 HRNRQ86YZ3 2850 aaPredicted RBP16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 IGSF23A1L1A6 192 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 FAM24AA6NFZ4 105 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 GPR37O15354 613 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 SNRNP70P08621 437 aaKnown RBP16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 CLINT1Q14677 625 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 OR8B3Q8NGG8 313 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 C2CD4CQ8TF44 421 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 OR8B2Q96RD0 313 aa16.85■□□□□ 0.29
LYSMD2-201ENST00000267838 RNF224P0DH78 156 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 KIR2DS2P43631 304 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 OR2G3Q8NGZ4 309 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 DDB2Q92466 427 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 NEIL1Q96FI4 390 aaPredicted RBP16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 S1PR3Q99500 378 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 PCP4L1A6NKN8 68 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 RBFOX2O43251 390 aaKnown RBP eCLIP16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 CHST1O43916 411 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 C1QL1O75973 258 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 GOSR1O95249 250 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 HPRT1P00492 218 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 THBS3P49746 956 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 FHITP49789 147 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 MEOX2P50222 304 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 ZFP82Q8N141 532 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 TMEM252Q8N6L7 170 aa16.84■□□□□ 0.29
LYSMD2-201ENST00000267838 ATP6V0CP27449 155 aa16.83■□□□□ 0.28
LYSMD2-201ENST00000267838 DPPA3Q6W0C5 159 aa16.83■□□□□ 0.28
LYSMD2-201ENST00000267838 ADTRPQ96IZ2 230 aa16.83■□□□□ 0.28
LYSMD2-201ENST00000267838 ZNRD1Q9P1U0 126 aa16.83■□□□□ 0.28
LYSMD2-201ENST00000267838 S100A8P05109 93 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 S100A6P06703 90 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 WDR25Q64LD2 544 aaPredicted RBP16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 H2BFWTQ7Z2G1 175 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 R3HDM4Q96D70 268 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 FBXO7Q9Y3I1 522 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 MARCH11A6NNE9 402 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 TMEM50AO95807 157 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 IGHV1-8P0DP01 117 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 RAB2AP61019 212 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 ETV3LQ6ZN32 361 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 C8orf31Q8N9H6 132 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 MALSU1Q96EH3 234 aa16.82■□□□□ 0.28
LYSMD2-201ENST00000267838 A0A087X0M5 115 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 A0A1B0GX30 115 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 FAM90A26D6RGX4 464 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 SYNGR2O43760 224 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 NDUFS7O75251 213 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 PAX9P55771 341 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 C11orf42Q8N5U0 333 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 ZNF383Q8NA42 475 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 OR5C1Q8NGR4 320 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 OR4S2Q8NH73 311 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 RAB40CQ96S21 281 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 KIAA1456Q9P272 454 aa16.81■□□□□ 0.28
LYSMD2-201ENST00000267838 ZNF462Q96JM2 2506 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 A0A1W2PPH5 198 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 DFFBO76075 338 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 HBE1P02100 147 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 AKR1C3P42330 323 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 SULT1A1P50225 295 aa16.8■□□□□ 0.28
LYSMD2-201ENST00000267838 EFNA4P52798 201 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms