RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 SSX7Q7RTT5 188 aa9.78□□□□□ -0.84
CDKL3-201ENST00000265334 ZCCHC24Q8N2G6 241 aaKnown RBP9.78□□□□□ -0.84
CDKL3-201ENST00000265334 RCC1LQ96I51 464 aaKnown RBP9.78□□□□□ -0.84
CDKL3-201ENST00000265334 EGLN1Q9GZT9 426 aa9.78□□□□□ -0.84
CDKL3-201ENST00000265334 TUBA4BQ9H853 241 aa9.78□□□□□ -0.84
CDKL3-201ENST00000265334 RPUSD1Q9UJJ7 312 aaKnown RBP9.78□□□□□ -0.84
CDKL3-201ENST00000265334 PKDREJQ9NTG1 2253 aa9.78□□□□□ -0.84
CDKL3-201ENST00000265334 LOC102723971A0A1B0GUV8 181 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 FAM90A27PA6NNH2 459 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 CEBPZOSA8MTT3 80 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 VSTM5A8MXK1 200 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 FCN3O75636 299 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 MMP23AO75900 390 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 SPCS3P61009 180 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 ADAM5Q6NVV9 412 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 DMRTC2Q8IXT2 367 aaPredicted RBP9.77□□□□□ -0.84
CDKL3-201ENST00000265334 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 OR10G4Q8NGN3 311 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 LINC00312Q9Y6C7 94 aa9.77□□□□□ -0.84
CDKL3-201ENST00000265334 TPRP12270 2363 aaKnown RBP9.77□□□□□ -0.85
CDKL3-201ENST00000265334 TRAV38-1A0A0B4J264 116 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 A0A1W2PPE3 182 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM178BH3BS89 294 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 H7C2Y5 167 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 VDAC2P45880 294 aaPredicted RBP9.77□□□□□ -0.85
CDKL3-201ENST00000265334 THBS3P49746 956 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 TLE1Q04724 770 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 MEF2CQ06413 473 aaPredicted RBP9.77□□□□□ -0.85
CDKL3-201ENST00000265334 POU2AF1Q16633 256 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 SLC25A48Q6ZT89 311 aaKnown RBP9.77□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF429Q86V71 674 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF383Q8NA42 475 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 OR10A7Q8NGE5 316 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 OR4S2Q8NH73 311 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 ADTRPQ96IZ2 230 aa9.77□□□□□ -0.85
CDKL3-201ENST00000265334 UNKLQ9H9P5 680 aaKnown RBP9.77□□□□□ -0.85
CDKL3-201ENST00000265334 hADV38S2A0JD32 116 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 E7EQL1 145 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 RBMXL2O75526 392 aaKnown RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 IGKV1D-33P01593 117 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 IGKV1-33P01594 117 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 OR2B8PP59922 312 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 MRPS11P82912 194 aaKnown RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 RHEBQ15382 184 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 SPINK9Q5DT21 86 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 C15orf54Q8N8G6 183 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 CA5BP1Q8WTZ4 195 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 CLCC1Q96S66 551 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 NKX6-3A6NJ46 265 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 SNRNP70P08621 437 aaKnown RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 IL6RP08887 468 aaPredicted RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 ERVK-16P61578 105 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 FLI1Q01543 452 aaPredicted RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 VKORC1L1Q8N0U8 176 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 Q8N7P7 452 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 RXFP4Q8TDU9 374 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 SAP30LQ9HAJ7 183 aa9.76□□□□□ -0.85
CDKL3-201ENST00000265334 CISD1Q9NZ45 108 aaKnown RBP9.76□□□□□ -0.85
CDKL3-201ENST00000265334 NBASA2RRP1 2371 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.75□□□□□ -0.85
CDKL3-201ENST00000265334 PRSS46E5RG02 174 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 TMPRSS2O15393 492 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 IFNA17P01571 189 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 CD3EP07766 207 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 FOLR2P14207 255 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 CTRB1P17538 263 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 AKR1C3P42330 323 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 CDSNQ15517 529 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 CTRB2Q6GPI1 263 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 LCN15Q6UWW0 184 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 C1orf87Q8N0U7 546 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 LYG1Q8N1E2 194 aa9.75□□□□□ -0.85
CDKL3-201ENST00000265334 SLC25A10Q9UBX3 287 aaPredicted RBP9.75□□□□□ -0.85
CDKL3-201ENST00000265334 PPIAL4EA0A075B759 164 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 PPIAL4DF5H284 164 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 M0R036 132 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 FBP1P09467 338 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 PPIAL4FP0DN26 164 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 BCL2P10415 239 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 FGF7P21781 194 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 GRNP28799 593 aaKnown RBP9.74□□□□□ -0.85
CDKL3-201ENST00000265334 TFF3Q07654 80 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 EFNB3Q15768 340 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 RHOVQ96L33 236 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 C20orf24Q9BUV8 137 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 NPCDR1Q9BY65 106 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM14BQ9NUH8 114 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms