RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 OR51G1Q8NGK1 321 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 SMDT1Q9H4I9 107 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 MUC22E2RYF6 1773 aaPredicted RBP16.7■□□□□ 0.26
CSPG5-201ENST00000264723 NDUFA2O43678 99 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 RAB7AP51149 207 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 OR4P4Q8NGL7 312 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 IL18BPO95998 194 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 TMEM11P17152 192 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 ELOBQ15370 118 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 SAXO1Q8IYX7 474 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 OPRK1P41145 380 aa16.7■□□□□ 0.26
CSPG5-201ENST00000264723 PGPEP1LA6NFU8 196 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 RPL29P47914 159 aaKnown RBP16.69■□□□□ 0.26
CSPG5-201ENST00000264723 NMSQ5H8A3 153 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 SGMS2Q8NHU3 365 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 TPPP3Q9BW30 176 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 B4DEV8 164 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BKO60814 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 NAPSAO96009 420 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 IGHV3-48P01763 117 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BJP06899 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 OR4A8P0C604 315 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BOP23527 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 CD1BP29016 333 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BBP33778 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BDP58876 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BCP62807 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 ARL16Q0P5N6 197 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST2H2BEQ16778 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 ACSF3Q4G176 576 aaPredicted RBP16.69■□□□□ 0.26
CSPG5-201ENST00000264723 GCSAMLQ5JQS6 135 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.69■□□□□ 0.26
CSPG5-201ENST00000264723 TRAT1Q6PIZ9 186 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BHQ93079 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BNQ99877 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HIST1H2BMQ99879 126 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 GAL3ST2Q9H3Q3 398 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 EYSQ5T1H1 3165 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 MARCH11A6NNE9 402 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 ADH4P08319 380 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 KRTDAPP60985 99 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 B2MP61769 119 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 HEPN1Q6WQI6 88 aa16.69■□□□□ 0.26
CSPG5-201ENST00000264723 ZNF324BQ6AW86 544 aaPredicted RBP16.68■□□□□ 0.26
CSPG5-201ENST00000264723 TOMM20LQ6UXN7 152 aa16.68■□□□□ 0.26
CSPG5-201ENST00000264723 DAZAP1Q96EP5 407 aaKnown RBP16.68■□□□□ 0.26
CSPG5-201ENST00000264723 MISP3Q96FF7 219 aa16.68■□□□□ 0.26
CSPG5-201ENST00000264723 IGKV3D-15A0A087WSY6 115 aa16.68■□□□□ 0.26
CSPG5-201ENST00000264723 RPL39P5Q59GN2 51 aa16.68■□□□□ 0.26
CSPG5-201ENST00000264723 RPEQ96AT9 228 aa16.68■□□□□ 0.26
CSPG5-201ENST00000264723 H0Y8G0 127 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 AGAP20933 346 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 MS4A10Q96PG2 267 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 PSPNO60542 156 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 IGKV1-5P01602 117 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 SPSB3Q6PJ21 355 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 ELOVL1Q9BW60 279 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 SLC25A10Q9UBX3 287 aaPredicted RBP16.67■□□□□ 0.26
CSPG5-201ENST00000264723 ZMAT5Q9UDW3 170 aaKnown RBP16.67■□□□□ 0.26
CSPG5-201ENST00000264723 UBE2CO00762 179 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 ZNF645Q8N7E2 425 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 OR13A1Q8NGR1 328 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 HARBI1Q96MB7 349 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 QTRT1Q9BXR0 403 aaKnown RBP16.67■□□□□ 0.26
CSPG5-201ENST00000264723 PITPNC1Q9UKF7 332 aa16.67■□□□□ 0.26
CSPG5-201ENST00000264723 IGHV3-21A0A0B4J1V1 117 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 IGHV2OR16-5A0A0B4J2B6 119 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 CEACAM1P13688 526 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 ATP6V1FQ16864 119 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 TIGITQ495A1 244 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 NRN1LQ496H8 165 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 SCNM1Q9BWG6 230 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 RALYQ9UKM9 306 aaKnown RBP16.66■□□□□ 0.26
CSPG5-201ENST00000264723 NCBP2LA6PVI3 153 aaKnown RBP16.66■□□□□ 0.26
CSPG5-201ENST00000264723 C1QTNF9BB2RNN3 333 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 CISD1Q9NZ45 108 aaKnown RBP16.66■□□□□ 0.26
CSPG5-201ENST00000264723 FCN1O00602 326 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 PMCHP20382 165 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 HOXA5P20719 270 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 LRRC75BQ2VPJ9 315 aa16.66■□□□□ 0.26
CSPG5-201ENST00000264723 ANKHD1Q8IWZ3 2542 aaKnown RBP16.66■□□□□ 0.26
CSPG5-201ENST00000264723 FOXI3A8MTJ6 420 aaPredicted RBP16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PPIAL4EA0A075B759 164 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PPIAL4DF5H284 164 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 TGOLN2O43493 480 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PPIAL4FP0DN26 164 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PLA2G5P39877 138 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 GNB2P62879 340 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PSG5Q15238 335 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 FOXL2NBQ6ZUU3 175 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 TUBA4BQ9H853 241 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 PPIAL4AQ9Y536 164 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 GRIFINA4D1Z8 144 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 OR10J4P0C629 311 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 FAM216AQ8WUB2 273 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 MS4A5Q9H3V2 200 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 HES4Q9HCC6 221 aa16.65■□□□□ 0.26
CSPG5-201ENST00000264723 RPL30P62888 115 aaKnown RBP16.65■□□□□ 0.26
CSPG5-201ENST00000264723 VMA21Q3ZAQ7 101 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms