RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 BCL2P10415 239 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 AGAP20933 346 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 CDX1P47902 265 aaPredicted RBP10.56□□□□□ -0.72
HERC6-201ENST00000264346 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 C1orf185Q5T7R7 199 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 ZNF324BQ6AW86 544 aaPredicted RBP10.56□□□□□ -0.72
HERC6-201ENST00000264346 OR4D5Q8NGN0 318 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 TMEM56-RWDD3S4R434 201 aa10.56□□□□□ -0.72
HERC6-201ENST00000264346 A6NNC1 897 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 HRASP01112 189 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 FAM78BQ5VT40 261 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 WDR82Q6UXN9 313 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 RCC1LQ96I51 464 aaKnown RBP10.55□□□□□ -0.72
HERC6-201ENST00000264346 QTRT1Q9BXR0 403 aaKnown RBP10.55□□□□□ -0.72
HERC6-201ENST00000264346 SAMD10Q9BYL1 202 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 VAX2Q9UIW0 290 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 CHD3Q12873 2000 aaKnown RBP10.55□□□□□ -0.72
HERC6-201ENST00000264346 PLXNB1O43157 2135 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 hADV38S2A0JD32 116 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
HERC6-201ENST00000264346 ADH4P08319 380 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 CXCL1P09341 107 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 ZNF90Q03938 601 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 OPRK1P41145 380 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
HERC6-201ENST00000264346 LRRC10Q5BKY1 277 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 RAB24Q969Q5 203 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 PARD6AQ9NPB6 346 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
HERC6-201ENST00000264346 F6UZH7 168 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 IGLV3-1P01715 115 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 TRGC1P0CF51 173 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 RPL30P62888 115 aaKnown RBP10.54□□□□□ -0.72
HERC6-201ENST00000264346 ID3Q02535 119 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 TFF3Q07654 80 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 RNF151Q2KHN1 245 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 OR4P4Q8NGL7 312 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 TMEM68Q96MH6 324 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 ELOVL1Q9BW60 279 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 FGF23Q9GZV9 251 aaPredicted RBP10.54□□□□□ -0.72
HERC6-201ENST00000264346 TMEM50AO95807 157 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 CD1BP29016 333 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 COLCA1Q6ZS62 124 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 ABHD17AQ96GS6 310 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 OR4A8P0C604 315 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 WT1P19544 449 aaPredicted RBP10.54□□□□□ -0.72
HERC6-201ENST00000264346 CD33P20138 364 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 GALR1P47211 349 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 TAS2R60P59551 318 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 SRSF4Q08170 494 aaKnown RBP10.54□□□□□ -0.72
HERC6-201ENST00000264346 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 SLC35E3Q7Z769 313 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 HARBI1Q96MB7 349 aa10.54□□□□□ -0.72
HERC6-201ENST00000264346 SEBOXQ9HB31 216 aaPredicted RBP10.54□□□□□ -0.72
HERC6-201ENST00000264346 IGHV1-18A0A0C4DH31 117 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 CEACAM18A8MTB9 384 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 MLNRO43193 412 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 NPY1RP25929 384 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 MRGPRGQ86SM5 289 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 Q8WTZ3 238 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 FAM216AQ8WUB2 273 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 NEIL1Q96FI4 390 aaPredicted RBP10.53□□□□□ -0.72
HERC6-201ENST00000264346 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 IQCF6A8MYZ5 107 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 J3QR06 171 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 FAM87AP0C7U9 286 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HOXA5P20719 270 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 TMEM140Q9NV12 185 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BKO60814 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BJP06899 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BOP23527 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BBP33778 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 TCL1AP56279 114 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BDP58876 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BCP62807 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST2H2BEQ16778 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.53□□□□□ -0.72
HERC6-201ENST00000264346 BAGE3Q86Y29 109 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BHQ93079 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BNQ99877 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 HIST1H2BMQ99879 126 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 TPPP3Q9BW30 176 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
HERC6-201ENST00000264346 SLC25A10Q9UBX3 287 aaPredicted RBP10.53□□□□□ -0.72
HERC6-201ENST00000264346 SS18L1O75177 396 aaPredicted RBP10.52□□□□□ -0.72
HERC6-201ENST00000264346 PLAUP00749 431 aa10.52□□□□□ -0.72
HERC6-201ENST00000264346 TDGF1P13385 188 aa10.52□□□□□ -0.72
HERC6-201ENST00000264346 RAB7AP51149 207 aa10.52□□□□□ -0.72
HERC6-201ENST00000264346 PKIAP61925 76 aa10.52□□□□□ -0.72
HERC6-201ENST00000264346 SEC14L6B5MCN3 397 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms