RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 CD33P20138 364 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 ERVK11-1P61568 191 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 OR5AC2Q9NZP5 309 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 PAM16Q9Y3D7 125 aa14.26□□□□□ -0.13
USP13-201ENST00000263966 MRPS18BQ9Y676 258 aaKnown RBP14.26□□□□□ -0.13
USP13-201ENST00000263966 FGF9P31371 208 aaPredicted RBP14.25□□□□□ -0.13
USP13-201ENST00000263966 FAM60AQ9NP50 221 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 IL6RP08887 468 aaPredicted RBP14.25□□□□□ -0.13
USP13-201ENST00000263966 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
USP13-201ENST00000263966 OR13A1Q8NGR1 328 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 KLK15Q9H2R5 256 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 IL36RNQ9UBH0 155 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 FUT9Q9Y231 359 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 IGHV3OR16-10A0A075B7F0 116 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 TMEM170BQ5T4T1 132 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 C12orf73Q69YU5 71 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 GVQW1Q8N7I0 195 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 H0Y980 276 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 CYB5R3P00387 301 aaPredicted RBP14.25□□□□□ -0.13
USP13-201ENST00000263966 TCRBV16S1A1N1A0A5B0 115 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 LCN2P80188 198 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 OR4D5Q8NGN0 318 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 PGLYRP4Q96LB8 373 aa14.25□□□□□ -0.13
USP13-201ENST00000263966 DSCR9P59020 149 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 PLP1P60201 277 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 CBLN3Q6UW01 205 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 ATG4DQ86TL0 474 aaPredicted RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 EML6Q6ZMW3 1958 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 CD300LDQ6UXZ3 194 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 H1FOOQ8IZA3 346 aaPredicted RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 RPRMQ9NS64 109 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 ODAMA1E959 279 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 C10orf111Q8N326 155 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 BEX4Q9NWD9 120 aaPredicted RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 OGG1O15527 345 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 TMEM167AQ8TBQ9 72 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 CXCL16Q9H2A7 254 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 HELZP42694 1942 aaKnown RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 HLA-DQA1P01909 254 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 TRPM3Q9HCF6 1732 aaPredicted RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 FAM27BQ5VT28 67 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 CEACAM8P31997 349 aaPredicted RBP14.24□□□□□ -0.13
USP13-201ENST00000263966 SMDT1Q9H4I9 107 aa14.24□□□□□ -0.13
USP13-201ENST00000263966 ATP5IP56385 69 aaPredicted RBP14.23□□□□□ -0.13
USP13-201ENST00000263966 BRWD3Q6RI45 1802 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 RAE1P78406 368 aaKnown RBP14.23□□□□□ -0.13
USP13-201ENST00000263966 LILRA6Q6PI73 481 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 TCF23Q7RTU1 214 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 PNKDQ8N490 385 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 TMEM86BQ8N661 226 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 AICDAQ9GZX7 198 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 FRRS1LQ9P0K9 344 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
USP13-201ENST00000263966 RTN4RL2Q86UN3 420 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 TSPAN2O60636 221 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 HOXB3P14651 431 aaPredicted RBP14.23□□□□□ -0.13
USP13-201ENST00000263966 ZIC4Q8N9L1 334 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 TRBV20OR9-2A0A075B6H5 130 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 SOCS1O15524 211 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 NPBWR2P48146 333 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 TNFSF18Q9UNG2 199 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 WDR81Q562E7 1941 aa14.23□□□□□ -0.13
USP13-201ENST00000263966 RND2P52198 227 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 PMCHL2Q9BQD1 86 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 MED19A0JLT2 244 aaPredicted RBP14.22□□□□□ -0.13
USP13-201ENST00000263966 ANKRD20A5PA0PJZ0 165 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 CT62P0C5K7 136 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 MRPL32Q9BYC8 188 aaKnown RBP14.22□□□□□ -0.13
USP13-201ENST00000263966 NEU3Q9UQ49 428 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 A0A087X0M5 115 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 TRGV4A0A0C4DH28 118 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 A0A1B0GX30 115 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 C1QAP02745 245 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 PILRBQ9UKJ0 227 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 NKX2-6A6NCS4 301 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 WDR34Q96EX3 536 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 RCC2Q9P258 522 aaKnown RBP14.22□□□□□ -0.13
USP13-201ENST00000263966 MGAMO43451 1857 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 ZNF729A6NN14 1252 aaPredicted RBP14.22□□□□□ -0.13
USP13-201ENST00000263966 EIF3GO75821 320 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP13-201ENST00000263966 PMCHL1Q16048 86 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 ZNF880Q6PDB4 577 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 C7orf71A4D174 169 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 LEPROTL1O95214 131 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 AMY1AP04745 511 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 EFNB2P52799 333 aa14.22□□□□□ -0.13
USP13-201ENST00000263966 TM4SF5O14894 197 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 RPS11P62280 158 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP13-201ENST00000263966 ZNF146Q15072 292 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 HKR1P10072 659 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 CKS1BP61024 79 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 MEF2CQ06413 473 aaPredicted RBP14.21□□□□□ -0.13
USP13-201ENST00000263966 NSUN5P1Q3KNT7 163 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 LTBP4Q8N2S1 1624 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 FOXI3A8MTJ6 420 aaPredicted RBP14.21□□□□□ -0.13
USP13-201ENST00000263966 CD81P60033 236 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 CSRP2Q16527 193 aa14.21□□□□□ -0.13
USP13-201ENST00000263966 LINC00470Q9BZP3 86 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms