RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 OOEPA6NGQ2 149 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 C17orf98A8MV24 154 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 NXPH2O95156 264 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 OR10J4P0C629 311 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 DEFA4P12838 97 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 BMP5P22003 454 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 GDF1P27539 372 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 AMTP48728 403 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 TMPRSS3P57727 454 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 ERVK11-1P61568 191 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 RPL31P62899 125 aaKnown RBP10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 ZNF718Q3SXZ3 478 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 OR2Y1Q8NGV0 311 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 UBALD1Q8TB05 177 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 OCIAD1Q9NX40 245 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 NAT8BQ9UHF3 227 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 ARL2-SNX15V9GYD0 113 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 SLC17A3O00476 420 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 ITGB1BP1O14713 200 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 WISP2O76076 250 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 IGHEP01854 428 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 AREGP15514 252 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 HNF1AP20823 631 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 GCHFRP30047 84 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 GNG10P50151 68 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 PRRX1P54821 245 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 RHOBP62745 196 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 COTL1Q14019 142 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 OR5B3Q8NH48 314 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 EAF1Q96JC9 268 aaPredicted RBP10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 BET1LQ9NYM9 111 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A0G2JMM0 328 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A1W2PPB8 328 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 A0A1W2PRS3 328 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 KIR3DP1A8MWS1 328 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 HYPMO75409 117 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 KLF7O75840 302 aaPredicted RBP10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 RFPL3SP0C7P2 107 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 SRFP11831 508 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 PLGLB1Q02325 96 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 RAB31Q13636 194 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 AARDQ4LEZ3 155 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 SPATA46Q5T0L3 261 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 Q8N976 141 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 ASCC3Q8N3C0 2202 aaKnown RBP10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 NKX6-3A6NJ46 265 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 GFRA1P56159 465 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 CX3CL1P78423 397 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 SLC35E4Q6ICL7 350 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 TREML4Q6UXN2 200 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 OR52E5Q8NH55 327 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 C22orf15Q8WYQ4 148 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 BORCS7Q96B45 105 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 SLC35D1Q9NTN3 355 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 CDC42EP3Q9UKI2 254 aa10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 MRPS17Q9Y2R5 130 aaKnown RBP10.34□□□□□ -0.75
CHMP2B-201ENST00000263780 DPRXA6NFQ7 191 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 K7EN84 100 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 ZNF324O75467 553 aaPredicted RBP10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 FOLR3P41439 243 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 GCNT2Q8N0V5 402 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 STPG4Q8N801 248 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 SCCPDHQ8NBX0 429 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 V9GYV3 84 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 YLPM1P49750 1951 aaKnown RBP10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 A0A1W2PS18 150 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 J3QW42 95 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 K7EP13 123 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 APH1AQ96BI3 265 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 NPVFQ9HCQ7 196 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 OSTCQ9NRP0 149 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 BOKQ9UMX3 212 aaPredicted RBP10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 CNTRLQ7Z7A1 2325 aa10.33□□□□□ -0.76
CHMP2B-201ENST00000263780 HAND1O96004 215 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 HBZP02008 142 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 GNG4P50150 75 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 CLDN18P56856 261 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 PSG7Q13046 419 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 OR1C1Q15619 314 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 PNKDQ8N490 385 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 NANOS1Q8WY41 292 aaKnown RBP10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 MGST2Q99735 147 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 HEYLQ9NQ87 328 aaPredicted RBP10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 MYO9BQ13459 2157 aa10.32□□□□□ -0.76
CHMP2B-201ENST00000263780 ZNF891A8MT65 544 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms