RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 TMEM105Q8N8V8 129 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 GPHA2Q96T91 129 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 AKIRIN1Q9H9L7 192 aaPredicted RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 RAMP1O60894 148 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 PF4P02776 101 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 TDRD6O60522 2096 aaKnown RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 SMAD7O15105 426 aaKnown RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 CSRP1P21291 193 aaKnown RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 RPS20P60866 119 aaKnown RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 OR1N2Q8NGR9 330 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 IMMP1LQ96LU5 166 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 DUX5Q96PT3 197 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 SIAH2O43255 324 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 REG1AP05451 166 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 ZNF25P17030 456 aaPredicted RBP14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 ZNF818PQ6ZRF7 136 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 DRAM1Q8N682 238 aa14.36□□□□□ -0.11
CROCCP3-201ENST00000263511 HKR1P10072 659 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 FAM53AQ6NSI3 398 aaPredicted RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 C19orf24Q9BVV8 132 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 PHLDA3Q9Y5J5 127 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 RGPD3A6NKT7 1758 aaPredicted RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 ZFC3H1O60293 1989 aaKnown RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 HSPB1P04792 205 aaKnown RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 CD81P60033 236 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 NRIP2Q9BQI9 281 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 C5orf66Q9H5L9 145 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 ZFP30Q9Y2G7 519 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 A1L4Q6 167 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 M0QZK8 103 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 ZIC3O60481 467 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 GGCTO75223 188 aaKnown RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 GCSHP23434 173 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 CKS2P33552 79 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 MRPL14Q6P1L8 145 aaKnown RBP14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 OR51M1Q9H341 326 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 IGKV3D-15A0A087WSY6 115 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 FAM181BA6NEQ2 426 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 IGKV3-15P01624 115 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 ACP7Q6ZNF0 438 aa14.35□□□□□ -0.11
CROCCP3-201ENST00000263511 RPS11P62280 158 aaKnown RBP eCLIP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 GVINP1Q7Z2Y8 2422 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 IFITM10A6NMD0 228 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 GDF9O60383 454 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 PET117Q6UWS5 81 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 LINC00518Q8N0U6 118 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 SMIM8Q96KF7 97 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 TBX15Q96SF7 602 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 ACAA1P09110 424 aaPredicted RBP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 CX3CL1P78423 397 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 LBHQ53QV2 105 aaPredicted RBP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 FADS6Q8N9I5 356 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 GALNT14Q96FL9 552 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 SSBP3Q9BWW4 388 aaPredicted RBP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 DPM3Q9P2X0 92 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 NRXN2Q9P2S2 1712 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 A6NDN8 102 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 F12P00748 615 aaPredicted RBP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 SNRPD3P62318 126 aaKnown RBP14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 BSPH1Q075Z2 132 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 AQP10Q96PS8 301 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 KIF13BQ9NQT8 1826 aa14.34□□□□□ -0.11
CROCCP3-201ENST00000263511 VKORC1L1Q8N0U8 176 aa14.33□□□□□ -0.11
CROCCP3-201ENST00000263511 NPIPB9F8W1W9 429 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 C1QL1O75973 258 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 BTF3P20290 206 aaKnown RBP14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 ZNF502Q8TBZ5 544 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 MRPS18CQ9Y3D5 142 aaKnown RBP14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 CKAP5Q14008 2032 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 TM4SF5O14894 197 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 ZNF324O75467 553 aaPredicted RBP14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 GPX1P07203 203 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 ANOS1P23352 680 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 CD99P14209 185 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 ASPHD2Q6ICH7 369 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 RTN4RQ9BZR6 473 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 IGHV2OR16-5A0A0B4J2B6 119 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 NPIPB3Q92617 1050 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 MARVELD3Q96A59 401 aa14.33□□□□□ -0.12
CROCCP3-201ENST00000263511 DOCK3Q8IZD9 2030 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 TMEM187Q14656 261 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 FAM168AQ92567 244 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 MRPL32Q9BYC8 188 aaKnown RBP14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 ZNFX1Q9P2E3 1918 aaKnown RBP14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 CD74P04233 296 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 TGFBR3LH3BV60 316 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 PARP14Q460N5 1801 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 STAG3L2P0CL84 134 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 LCN2P80188 198 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 TMEM177Q53S58 311 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 PUSL1Q8N0Z8 303 aaKnown RBP14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 ELOVL1Q9BW60 279 aa14.32□□□□□ -0.12
CROCCP3-201ENST00000263511 A0A0G2JMM0 328 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 A0A1W2PPB8 328 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 A0A1W2PRS3 328 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 KIR3DP1A8MWS1 328 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 TRGV3P03979 118 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 HLA-DQA1P01909 254 aa14.31□□□□□ -0.12
CROCCP3-201ENST00000263511 OR4C46A6NHA9 309 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms