RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ZDHHC16Q969W1 377 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 WASHC3Q9Y3C0 194 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 FER1L5A0AVI2 2057 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 TNRC18O15417 2968 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-201ENST00000261443 GTF3C1Q12789 2109 aa6.07□□□□□ -1.44
CSDE1-201ENST00000261443 A0A1B0GX78 115 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 LILRA5A6NI73 299 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 LRRC30A6NM36 301 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 LINC01565O15544 149 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 B4GALT1P15291 398 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 FKBP2P26885 142 aaKnown RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 RHOBP62745 196 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 CX3CL1P78423 397 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 VWC2Q2TAL6 325 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 RNF138Q8WVD3 245 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 MTCH1Q9NZJ7 389 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 C19orf25Q9UFG5 118 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 V9GYV3 84 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 GAGE12BA1L429 117 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 BMPR1BO00238 502 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 RBMXL2O75526 392 aaKnown RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 VAMP5O95183 116 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 CXorf1O96002 111 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 IGHV4-34P06331 123 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 DUSP3P51452 185 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 RIPPLY3P57055 190 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 ESPL1Q14674 2120 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 SPINK9Q5DT21 86 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 PARM1Q6UWI2 310 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 NFAM1Q8NET5 270 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 UBALD1Q8TB05 177 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 EAF1Q96JC9 268 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 CHRNA10Q9GZZ6 450 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 MEGF9Q9H1U4 602 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 YTHDF2Q9Y5A9 579 aaKnown RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 H0YJW9 148 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-201ENST00000261443 OTX2P32243 289 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 TCL1AP56279 114 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 COX19Q49B96 90 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 PRAMEF20Q5VT98 475 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 TMEM92Q6UXU6 159 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 ANKRD37Q7Z713 158 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 DRAM1Q8N682 238 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 OR52L2PQ8NGH6 319 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 ST6GALNAC6Q969X2 333 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 OR2D2Q9H210 308 aa6.06□□□□□ -1.44
CSDE1-201ENST00000261443 EML6Q6ZMW3 1958 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 TRBV6-6A0A0A6YYG2 114 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 HSBP1O75506 76 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 NUDT3O95989 172 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 AMY1AP04745 511 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 CD1BP29016 333 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 SELENOVP59797 346 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF816Q0VGE8 651 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-201ENST00000261443 C1orf185Q5T7R7 199 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 MRPL54Q6P161 138 aaKnown RBP6.05□□□□□ -1.44
CSDE1-201ENST00000261443 WDR74Q6RFH5 385 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-201ENST00000261443 Q8N7P7 452 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 TMEM38BQ9NVV0 291 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 WDR83OSQ9Y284 106 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 DCHS1Q96JQ0 3298 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 FAM181BA6NEQ2 426 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 C9JCJ5 164 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 M0R2Z0 102 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 RRHO14718 337 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 RAMP3O60896 148 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 HLA-DQA1P01909 254 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 APCSP02743 223 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 LINC00869P0C866 280 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 STAG3L2P0CL84 134 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 STAG3L3P0CL85 134 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 CLDN18P56856 261 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 FXYD3Q14802 87 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 KRTAP27-1Q3LI81 207 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 C7orf61Q8IZ16 206 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 SCCPDHQ8NBX0 429 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 FGFBP3Q8TAT2 258 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 NEUROG1Q92886 237 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF488Q96MN9 340 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 OR2H1Q9GZK4 316 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 FGF23Q9GZV9 251 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF430Q9H8G1 570 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-201ENST00000261443 DEPPQ9NTK1 212 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 LY96Q9Y6Y9 160 aa6.05□□□□□ -1.44
CSDE1-201ENST00000261443 TRAV24A0A0B4J272 114 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 SYNGR1O43759 233 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 UBE2G1P62253 170 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 TNXAQ16473 311 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 ZNF718Q3SXZ3 478 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 PDLIM3Q53GG5 364 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-201ENST00000261443 EBLN2Q6P2I7 272 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 DEFB125Q8N687 156 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 RNASE7Q9H1E1 156 aaKnown RBP6.04□□□□□ -1.44
CSDE1-201ENST00000261443 CACNA1DQ01668 2161 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 ABCA7Q8IZY2 2146 aa6.04□□□□□ -1.44
CSDE1-201ENST00000261443 TRGV10A0A0A0MS01 117 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms