RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GNG4P50150 75 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 CTBP2P56545 445 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 TNFAIP6P98066 277 aaPredicted RBP2.81□□□□□ -1.96
CCDC54-201ENST00000261058 DEFA5Q01523 94 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 HIST1H1AQ02539 215 aaPredicted RBP2.81□□□□□ -1.96
CCDC54-201ENST00000261058 SMAGPQ0VAQ4 97 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 TTC32Q5I0X7 151 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 KDM4DQ6B0I6 523 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 SFXN4Q6P4A7 337 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 RPL22L1Q6P5R6 122 aaKnown RBP2.81□□□□□ -1.96
CCDC54-201ENST00000261058 GTF2H5Q6ZYL4 71 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF720Q7Z2F6 126 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF664Q8N3J9 261 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM86BQ8N661 226 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 KRTCAP2Q8N6L1 136 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 Q8N9L7 120 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR1N2Q8NGR9 330 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR2G3Q8NGZ4 309 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 RXFP4Q8TDU9 374 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 BLNKQ8WV28 456 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR5P3Q8WZ94 311 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 OR4K3Q96R72 315 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 MGLLQ99685 303 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 GINS4Q9BRT9 223 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 SMIM3Q9BZL3 60 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 TUBA4BQ9H853 241 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 COMMD3Q9UBI1 195 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 SLC23A2Q9UGH3 650 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 BTRCQ9Y297 605 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 RFNGQ9Y644 331 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 MYH13Q9UKX3 1938 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ARID1AO14497 2285 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 ADGRL2O95490 1459 aa2.81□□□□□ -1.96
CCDC54-201ENST00000261058 SIGLEC1Q9BZZ2 1709 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 KIAA1551Q9HCM1 1747 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 PIKFYVEQ9Y2I7 2098 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 ADAMTS12P58397 1594 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 AKAP11Q9UKA4 1901 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 SSH2Q76I76 1423 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 A0A1B0GV50 99 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 D6RAR5 112 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 REM1O75628 298 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 IGKV1D-16P01601 117 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 SERPINE1P05121 402 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 PFN1P07737 140 aaKnown RBP2.8□□□□□ -1.96
CCDC54-201ENST00000261058 OR5AC1P0C628 307 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 MIPP30301 263 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 TAS2R20P59543 309 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 RPS25P62851 125 aaKnown RBP2.8□□□□□ -1.96
CCDC54-201ENST00000261058 GNG5P63218 68 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 RGNQ15493 299 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 CCSMST1Q4G0I0 132 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 LRRC10Q5BKY1 277 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 OR10K2Q6IF99 312 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 TEX43Q6ZNM6 134 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 SLC35G3Q8N808 338 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 OR4K5Q8NGD3 323 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 OR51A2Q8NGJ7 313 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 THEM6Q8WUY1 208 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 GPR146Q96CH1 333 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM70Q9BUB7 260 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF471Q9BX82 626 aaPredicted RBP2.8□□□□□ -1.96
CCDC54-201ENST00000261058 SAMD10Q9BYL1 202 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 CXorf21Q9HAI6 301 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 NOX3Q9HBY0 568 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 HES4Q9HCC6 221 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 SMCO4Q9NRQ5 59 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 ACER3Q9NUN7 267 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 DMAC2Q9NW81 257 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 NUFIP1Q9UHK0 495 aaKnown RBP2.8□□□□□ -1.96
CCDC54-201ENST00000261058 TBX21Q9UL17 535 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 HDGFL3Q9Y3E1 203 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 UBIAD1Q9Y5Z9 338 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 DYSFO75923 2080 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 MYH10P35580 1976 aa2.8□□□□□ -1.96
CCDC54-201ENST00000261058 TET2Q6N021 2002 aaPredicted RBP2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ZCCHC11Q5TAX3 1644 aaKnown RBP2.79□□□□□ -1.96
CCDC54-201ENST00000261058 SHANK2Q9UPX8 1470 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 TRBV6-6A0A0A6YYG2 114 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 A6NDX4 124 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 COLCA2A8K830 154 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 PEX7O00628 323 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 MYL12BO14950 172 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 DHRS3O75911 302 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 MPC2O95563 127 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 TTRP02766 147 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ERGP11308 486 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 IMPA1P29218 277 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 SRIP30626 198 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 GABRA3P34903 492 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 G6PCP35575 357 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 TGFBR1P36897 503 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 ARPP19P56211 112 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 S100A10P60903 97 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 HBG1P69891 147 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 HBG2P69892 147 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 SLC35A2P78381 396 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 IFITM3Q01628 133 aa2.79□□□□□ -1.96
CCDC54-201ENST00000261058 PRDX1Q06830 199 aaKnown RBP2.79□□□□□ -1.96
CCDC54-201ENST00000261058 HSD52Q0P140 79 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms