RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 C10orf91Q5T1B1 145 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 ZNF880Q6PDB4 577 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 OR1L1Q8NH94 360 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 TMED6Q8WW62 240 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 VPREB3Q9UKI3 123 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 PRELID3BQ9Y3B1 194 aa13.53□□□□□ -0.24
SDCBP-201ENST00000260130 TRBV6-6A0A0A6YYG2 114 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 IGHV3-43A0A0B4J1X8 118 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 F8W036 122 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 H7C2Y5 167 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 GPR31O00270 319 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 ADAP1O75689 374 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 H2AFB1P0C5Y9 115 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 IGHV3-43DP0DP04 118 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 CEACAM3P40198 252 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 GNG10P50151 68 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.24
SDCBP-201ENST00000260130 BLOC1S1P78537 153 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 SPAG16Q8N0X2 631 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 PUSL1Q8N0Z8 303 aaKnown RBP13.52□□□□□ -0.24
SDCBP-201ENST00000260130 CMSS1Q9BQ75 279 aaKnown RBP13.52□□□□□ -0.24
SDCBP-201ENST00000260130 HDHD3Q9BSH5 251 aaPredicted RBP13.52□□□□□ -0.24
SDCBP-201ENST00000260130 ST6GALNAC5Q9BVH7 336 aa13.52□□□□□ -0.24
SDCBP-201ENST00000260130 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.24
SDCBP-201ENST00000260130 SERPINE3A8MV23 424 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 ECI1P42126 302 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 ANKRD55Q3KP44 614 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 AADACL3Q5VUY0 350 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 EIF5AL1Q6IS14 154 aaKnown RBP13.52□□□□□ -0.25
SDCBP-201ENST00000260130 Q6ZPA2 131 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 MOB1BQ7L9L4 216 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 C5orf24Q7Z6I8 188 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 PIFOQ8TCI5 191 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 SAT2Q96F10 170 aaPredicted RBP13.52□□□□□ -0.25
SDCBP-201ENST00000260130 EHFQ9NZC4 300 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 DNHD1Q96M86 4753 aa13.52□□□□□ -0.25
SDCBP-201ENST00000260130 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 TAAR5O14804 337 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 GPR137BO60478 399 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 SNAPINO95295 136 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 CRYBA1P05813 215 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 HKR1P10072 659 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 HMGN3Q15651 99 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 Q3ZCU0 254 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 FAM53AQ6NSI3 398 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-201ENST00000260130 GALMQ96C23 342 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 OR2S2Q9NQN1 319 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 OR5AC2Q9NZP5 309 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 GNG12Q9UBI6 72 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 C14orf166Q9Y224 244 aaKnown RBP13.51□□□□□ -0.25
SDCBP-201ENST00000260130 AMMECR1Q9Y4X0 333 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-201ENST00000260130 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 ZNF705EA8MWA4 302 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-201ENST00000260130 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 PI3P19957 117 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 RAB13P51153 203 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 AKR1C2P52895 323 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 RPL15P61313 204 aaKnown RBP13.51□□□□□ -0.25
SDCBP-201ENST00000260130 AKR1C1Q04828 323 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 PJVKQ0ZLH3 352 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 C8orf31Q8N9H6 132 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 SPATA3Q8NHX4 192 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 SEC11CQ9BY50 192 aa13.51□□□□□ -0.25
SDCBP-201ENST00000260130 A0A1W2PPE3 182 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 MSGN1A6NI15 193 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 DYNLT3P51808 116 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 HTD2P86397 168 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 LY6EQ16553 131 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 GUCA2BQ16661 112 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 TPTE2P1Q5T6R2 138 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 OR10V1Q8NGI7 309 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 OR10X1Q8NGY0 326 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 OR10C1Q96KK4 312 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
SDCBP-201ENST00000260130 RAB32Q13637 225 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 LINC00311Q8N616 119 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 OR52L2PQ8NGH6 319 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 SLC5A7Q9GZV3 580 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 Q9N2K0 584 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 JPT1Q9UK76 154 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 IL15RAQ13261 267 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 MORN2Q502X0 79 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 DHRS7BQ6IAN0 325 aaPredicted RBP13.49□□□□□ -0.25
SDCBP-201ENST00000260130 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
SDCBP-201ENST00000260130 PRR13Q9NZ81 148 aa13.49□□□□□ -0.25
SDCBP-201ENST00000260130 PVALBP20472 110 aaPredicted RBP13.48□□□□□ -0.25
SDCBP-201ENST00000260130 S100A10P60903 97 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 ZNF439Q8NDP4 499 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 OR4A4PQ8NGN8 299 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 RPEQ96AT9 228 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 SMIM8Q96KF7 97 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 UQCC1Q9NVA1 299 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 C1RLQ9NZP8 487 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 GSKIPQ9P0R6 139 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 MLXQ9UH92 298 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 HOXB5P09067 269 aa13.48□□□□□ -0.25
SDCBP-201ENST00000260130 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms