RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 CKS1BP61024 79 aa11.78□□□□□ -0.52
LIMD2-201ENST00000259006 HOXA4Q00056 320 aaPredicted RBP11.78□□□□□ -0.52
LIMD2-201ENST00000259006 HAPLN4Q86UW8 402 aa11.78□□□□□ -0.52
LIMD2-201ENST00000259006 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
LIMD2-201ENST00000259006 MTCH1Q9NZJ7 389 aa11.78□□□□□ -0.52
LIMD2-201ENST00000259006 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.52
LIMD2-201ENST00000259006 C1QTNF9BB2RNN3 333 aa11.77□□□□□ -0.52
LIMD2-201ENST00000259006 G3V4G9 280 aa11.77□□□□□ -0.52
LIMD2-201ENST00000259006 AMTP48728 403 aa11.77□□□□□ -0.52
LIMD2-201ENST00000259006 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.52
LIMD2-201ENST00000259006 WIPI1Q5MNZ9 446 aaPredicted RBP11.77□□□□□ -0.52
LIMD2-201ENST00000259006 TMEM38BQ9NVV0 291 aa11.77□□□□□ -0.52
LIMD2-201ENST00000259006 PTRH2Q9Y3E5 179 aaKnown RBP11.77□□□□□ -0.52
LIMD2-201ENST00000259006 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.52
LIMD2-201ENST00000259006 ICE1Q9Y2F5 2266 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 NGFP01138 241 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 BAXQ07812 192 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 PRDX4Q13162 271 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 SPATA46Q5T0L3 261 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 RPP25LQ8N5L8 163 aaKnown RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 C5orf17Q8NAS9 161 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 OR2H1Q9GZK4 316 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 TBL2Q9Y4P3 447 aaKnown RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 HAND1O96004 215 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 KRASP01116 189 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 RPL15P61313 204 aaKnown RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 WDYHV1Q96HA8 205 aa11.77□□□□□ -0.53
LIMD2-201ENST00000259006 FGF23Q9GZV9 251 aaPredicted RBP11.77□□□□□ -0.53
LIMD2-201ENST00000259006 FAM166BA8MTA8 275 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PAGE4O60829 102 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 CFIP05156 583 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 RFPL3SP0C7P2 107 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 CBLN1P23435 193 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PPOXP50336 477 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 CCL7P80098 99 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 Q8N976 141 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 MRPS16Q9Y3D3 137 aaKnown RBP11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PXMP4Q9Y6I8 212 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 IGHV2-26A0A0B4J1V2 119 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 TRAV8-6A0A0B4J262 113 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PPIAL4CA0A0B4J2A2 164 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PPIAL4DF5H284 164 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 TRAPPC2LH3BP13 241 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 CYP2G1PQ6ZSU1 146 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 ZNF808Q8N4W9 903 aaPredicted RBP11.76□□□□□ -0.53
LIMD2-201ENST00000259006 ZNF525Q8N782 197 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 FAM222BQ8WU58 562 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 PLPPR2Q96GM1 343 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 UHRF2Q96PU4 802 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
LIMD2-201ENST00000259006 EXPH5Q8NEV8 1989 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 ESDP10768 282 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 LINC00205P59089 165 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 TGFBR3Q03167 851 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 SRSF7Q16629 238 aaKnown RBP eCLIP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 LRRC10Q5BKY1 277 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 WDR74Q6RFH5 385 aaPredicted RBP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 OR2Z1Q8NG97 314 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 A0A1W2PQM1 296 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 SIRPB1O00241 398 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 NUDT3O95989 172 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 IGKV1-39P01597 117 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 IGKV1D-39P04432 117 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 LIFP15018 202 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 RPS20P60866 119 aaKnown RBP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 PPP1CBP62140 327 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 ZNF816Q0VGE8 651 aaPredicted RBP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 ODF1Q14990 250 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 TMEM177Q53S58 311 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 FADS6Q8N9I5 356 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 CLDN23Q96B33 292 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 CUL9Q8IWT3 2517 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MRGPRGQ86SM5 289 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MED12LQ86YW9 2145 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
LIMD2-201ENST00000259006 RAC3P60763 192 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 SLC38A11Q08AI6 406 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 ACSM6Q6P461 480 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 CHRNA10Q9GZZ6 450 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 ZFHX4Q86UP3 3567 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 RHBDL1O75783 438 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 IGKV1-5P01602 117 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 GYPAP02724 150 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 NTF3P20783 257 aa11.74□□□□□ -0.53
LIMD2-201ENST00000259006 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms