RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZFC3H1O60293 1989 aaKnown RBP7.42□□□□□ -1.22
PTCD3-201ENST00000254630 MUC1P15941 1255 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-201ENST00000254630 PEAR1Q5VY43 1037 aaPredicted RBP7.42□□□□□ -1.22
PTCD3-201ENST00000254630 ABHD17AQ96GS6 310 aa7.42□□□□□ -1.22
PTCD3-201ENST00000254630 OR4C12Q96R67 309 aa7.42□□□□□ -1.22
PTCD3-201ENST00000254630 TM4SF5O14894 197 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 CKS2P33552 79 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 NMUP48645 174 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 C1QTNF12Q5T7M4 302 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 GALNT14Q96FL9 552 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 WDYHV1Q96HA8 205 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 SMIM8Q96KF7 97 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 MAP1LC3AQ9H492 121 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 IGKV3D-11A0A0A0MRZ8 115 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 NPIPB13A6NJU9 1138 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 NPIPB4C9JG80 1138 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 TRGV3P03979 118 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 SH3BGRL3Q9H299 93 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 ZMAT5Q9UDW3 170 aaKnown RBP7.41□□□□□ -1.22
PTCD3-201ENST00000254630 TUBD1Q9UJT1 453 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 MRPS18CQ9Y3D5 142 aaKnown RBP7.41□□□□□ -1.22
PTCD3-201ENST00000254630 CECR9P0C854 216 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 NPPCP23582 126 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 UNC119Q13432 240 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 DNLZQ5SXM8 178 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 VN1R17PQ8TDU5 208 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 C5orf66Q9H5L9 145 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 SCN10AQ9Y5Y9 1956 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 GPR82Q96P67 336 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 SMDT1Q9H4I9 107 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 PPP1R3EQ9H7J1 279 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 TMEM177Q53S58 311 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 CYP2G1PQ6ZSU1 146 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 DRAM1Q8N682 238 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 APCDD1LQ8NCL9 501 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 CHD5Q8TDI0 1954 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 DIRC3C9JPN6 131 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 IGKV1D-33P01593 117 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 IGKV1-33P01594 117 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 HSPB1P04792 205 aaKnown RBP7.41□□□□□ -1.22
PTCD3-201ENST00000254630 RPLP1P05386 114 aaKnown RBP7.41□□□□□ -1.22
PTCD3-201ENST00000254630 CRYBA2P53672 197 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 RPS11P62280 158 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTCD3-201ENST00000254630 PRSS8Q16651 343 aa7.41□□□□□ -1.22
PTCD3-201ENST00000254630 H0YL77 283 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 CD69Q07108 199 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF56Q15929 161 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF502Q8TBZ5 544 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 MIEN1Q9BRT3 115 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 C7orf66A4D0T2 115 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 UMODP07911 640 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 STAG3L2P0CL84 134 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 C8orf88P0DMB2 117 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 POC1AQ8NBT0 407 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 RARRES2Q99969 163 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 MOB4Q9Y3A3 225 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 ZIC3O60481 467 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 CA2P00918 260 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 RAB9AP51151 201 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 MFAP2P55001 183 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 UCP3P55916 312 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 DNM1P46Q6ZS02 220 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 ZNRF1Q8ND25 227 aa7.4□□□□□ -1.22
PTCD3-201ENST00000254630 TGFBR3LH3BV60 316 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 PIN1P1O15428 100 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 GLRXP35754 106 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 LINC01590Q5TEZ4 76 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 SIP14410 1827 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 MOSP00540 346 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 TNFSF10P50591 281 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 LINC00305Q7Z4B0 112 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.4□□□□□ -1.23
PTCD3-201ENST00000254630 AQP10Q96PS8 301 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 TCF19Q9Y242 345 aa7.4□□□□□ -1.23
PTCD3-201ENST00000254630 SBF1O95248 1867 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 GOLGA4Q13439 2230 aaKnown RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 LTBRP36941 435 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 CSRP3P50461 194 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 SGMS2Q8NHU3 365 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 TUBA4BQ9H853 241 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 DICER1Q9UPY3 1922 aaKnown RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 TMEM14DPA8MWL7 114 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 RAMP1O60894 148 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 F12P00748 615 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 TXNDC17Q9BRA2 123 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 YAE1D1Q9NRH1 226 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 M0QZK8 103 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 GCGP01275 180 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 LGALS3P17931 250 aaKnown RBP7.39□□□□□ -1.23
PTCD3-201ENST00000254630 KLK2P20151 261 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 PPP1R27Q86WC6 154 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 C9orf106Q8NAJ2 232 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 RHOVQ96L33 236 aa7.39□□□□□ -1.23
PTCD3-201ENST00000254630 IQCF6A8MYZ5 107 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms