RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 GALR1P47211 349 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 STXBP6Q8NFX7 210 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 MBD3L2Q8NHZ7 208 aaPredicted RBP14.35□□□□□ -0.11
ACTN4-201ENST00000252699 CHODLQ9H9P2 273 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 NAT8Q9UHE5 227 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 H0Y8G0 127 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 FAM157CP0CG43 387 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 OTX1P32242 354 aaPredicted RBP14.35□□□□□ -0.11
ACTN4-201ENST00000252699 FAM222BQ8WU58 562 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 SEC11CQ9BY50 192 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 KIF26AQ9ULI4 1882 aaPredicted RBP14.35□□□□□ -0.11
ACTN4-201ENST00000252699 IGKV1-27A0A075B6S5 117 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 TRBV6-7A0A0A0MS04 114 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 FOXH1O75593 365 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 RND3P61587 244 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 ZNF788Q6ZQV5 615 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 GTF3AQ92664 365 aaKnown RBP14.35□□□□□ -0.11
ACTN4-201ENST00000252699 SLC25A15Q9Y619 301 aa14.35□□□□□ -0.11
ACTN4-201ENST00000252699 GATCO43716 136 aaKnown RBP14.34□□□□□ -0.11
ACTN4-201ENST00000252699 HIST1H3AP68431 136 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 BATFQ16520 125 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 SPSB4Q96A44 273 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 QTRT1Q9BXR0 403 aaKnown RBP14.34□□□□□ -0.11
ACTN4-201ENST00000252699 WDR61Q9GZS3 305 aaKnown RBP14.34□□□□□ -0.11
ACTN4-201ENST00000252699 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 IGKV1D-8A0A087WSZ0 117 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 C17orf98A8MV24 154 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 S100A8P05109 93 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 MEF2CQ06413 473 aaPredicted RBP14.34□□□□□ -0.11
ACTN4-201ENST00000252699 FAM208BQ5VWN6 2430 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 IFITM2Q01629 132 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 DPPA3Q6W0C5 159 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 FAM216AQ8WUB2 273 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 TMEM37Q8WXS4 190 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 SMIM8Q96KF7 97 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.34□□□□□ -0.113e-8■■■□□ 16
ACTN4-201ENST00000252699 TRBV23-1A0A0A0MS06 115 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 PIP4P1Q86T03 277 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 CREBBPQ92793 2442 aa14.34□□□□□ -0.11
ACTN4-201ENST00000252699 IGKV1D-13A0A0B4J2D9 117 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 CORTO00230 105 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 HYPMO75409 117 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 IGKV1-13P0DP09 117 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 FOXL2NBQ6ZUU3 175 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 SSX7Q7RTT5 188 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 OR5R1Q8NH85 324 aa14.33□□□□□ -0.11
ACTN4-201ENST00000252699 MPTX1A8MV57 137 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 LINC00869P0C866 280 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 RND2P52198 227 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 FAM166AQ6J272 317 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 TOLLIPQ9H0E2 274 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 IGKV3-7A0A075B6H7 116 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 DNASE2O00115 360 aaPredicted RBP14.33□□□□□ -0.12
ACTN4-201ENST00000252699 CDKN1AP38936 164 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 RNF144BQ7Z419 303 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 OR1L6Q8NGR2 347 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 LINC00312Q9Y6C7 94 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 C7orf77A4D0Y5 90 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 LDLRAD4O15165 306 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 IGHV1-46P01743 117 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 SNRPCP09234 159 aaKnown RBP14.33□□□□□ -0.12
ACTN4-201ENST00000252699 CCL3L1P16619 93 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 SELENOTP62341 195 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 KHDC3LQ587J8 217 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 UNQ6494/PRO21346Q6UXR6 183 aa14.33□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF735P0CB33 412 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 MIC13Q5XKP0 118 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 ZNF497Q6ZNH5 498 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 TXN2Q99757 166 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 MSGN1A6NI15 193 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 PRSS33Q8NF86 280 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 FAM210BQ96KR6 192 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 A0A0G2JNJ9 132 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 LYNX1G3V0Z9 82 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 LYNX1P0DP58 116 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 Q9UFV3 132 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 WFIKKN1Q96NZ8 548 aa14.32□□□□□ -0.12
ACTN4-201ENST00000252699 SSBP3Q9BWW4 388 aaPredicted RBP14.32□□□□□ -0.12
ACTN4-201ENST00000252699 BCL2P10415 239 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 NBL1P41271 181 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 SUMO1P63165 101 aaKnown RBP14.31□□□□□ -0.12
ACTN4-201ENST00000252699 PCSK4Q6UW60 755 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 UNQ5815/PRO19632Q6UWF5 114 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 DNM1P46Q6ZS02 220 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 TRAPPC1Q9Y5R8 145 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 H3BQ15 152 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 PDE6DO43924 150 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 LCN2P80188 198 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 OR10G8Q8NGN5 311 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 GAR1Q9NY12 217 aaKnown RBP14.31□□□□□ -0.12
ACTN4-201ENST00000252699 DPM3Q9P2X0 92 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 NAT8BQ9UHF3 227 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 ACACBO00763 2458 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 REG1AP05451 166 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 NAT1P18440 290 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 DLK1P80370 383 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 CBLN2Q8IUK8 224 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 P2RX4Q99571 388 aa14.31□□□□□ -0.12
ACTN4-201ENST00000252699 HIGD1AQ9Y241 93 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms