RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CR1LQ2VPA4 569 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 CT45A1Q5HYN5 189 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 TRAT1Q6PIZ9 186 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 CBLN2Q8IUK8 224 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 SVBPQ8N300 66 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 CT45A3Q8NHU0 189 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 MISP3Q96FF7 219 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 HSD17B10Q99714 261 aaKnown RBP12.17□□□□□ -0.46
MBD4-201ENST00000249910 VKORC1Q9BQB6 163 aa12.17□□□□□ -0.46
MBD4-201ENST00000249910 PIGBOS1A0A0B4J2F0 54 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 KBTBD11-OT1A0A1B0GTJ5 212 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 YPEL1O60688 119 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 PLAUP00749 431 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 FOLR2P14207 255 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 NPBWR1P48145 328 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 DVL1P1P54792 670 aaPredicted RBP12.16□□□□□ -0.46
MBD4-201ENST00000249910 NUTF2P61970 127 aaKnown RBP12.16□□□□□ -0.46
MBD4-201ENST00000249910 ZNF788Q6ZQV5 615 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 RARRES2Q99969 163 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 FAM157AC9JC47 383 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 E7EQL1 145 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 F2RL2O00254 374 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 RAB2AP61019 212 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 GUK1Q16774 197 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 ZNF66Q6ZN08 573 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 Q8TCH9 128 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 SCRT1Q9BWW7 348 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 TMPRSS5Q9H3S3 457 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 ZNF665Q9H7R5 613 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.16□□□□□ -0.46
MBD4-201ENST00000249910 HSPB7Q9UBY9 170 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 HCFC1P51610 2035 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 HIVEP3Q5T1R4 2406 aa12.16□□□□□ -0.46
MBD4-201ENST00000249910 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.46
MBD4-201ENST00000249910 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 FCN3O75636 299 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 OR9G9P0C7N8 305 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 SEC11CQ9BY50 192 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 VSIRQ9H7M9 311 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 RAB5CP51148 216 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 MSMO1Q15800 293 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 R3HDM4Q96D70 268 aa12.15□□□□□ -0.46
MBD4-201ENST00000249910 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
MBD4-201ENST00000249910 SAA2-SAA4A0A096LPE2 208 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 IFNA5P01569 189 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 SAA2P0DJI9 122 aaPredicted RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 PRAMEF5Q5TYX0 476 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 ZNF383Q8NA42 475 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 RNASE6Q93091 150 aaKnown RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 OR4C12Q96R67 309 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 QTRT1Q9BXR0 403 aaKnown RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 TRAV3A0A0B4J244 114 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 C1orf196B1AJZ1 125 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 CCL21O00585 134 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 PAX6P26367 422 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 AKR1C3P42330 323 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 TAS2R30P59541 319 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 CARHSP1Q9Y2V2 147 aaKnown RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 STRAPQ9Y3F4 350 aaKnown RBP12.14□□□□□ -0.47
MBD4-201ENST00000249910 MALRD1Q5VYJ5 2156 aa12.14□□□□□ -0.47
MBD4-201ENST00000249910 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 DFFBO76075 338 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 LYPD2Q6UXB3 125 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 GNPNAT1Q96EK6 184 aaPredicted RBP12.13□□□□□ -0.47
MBD4-201ENST00000249910 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 CEBPZOSA8MTT3 80 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 C1QTNF9P0C862 333 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 CCL3L1P16619 93 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 TEX36Q5VZQ5 186 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 SPSB3Q6PJ21 355 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 DYNLRB1Q9NP97 96 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 SLC25A10Q9UBX3 287 aaPredicted RBP12.13□□□□□ -0.47
MBD4-201ENST00000249910 PKD1L2Q7Z442 2459 aa12.13□□□□□ -0.47
MBD4-201ENST00000249910 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 CIDEAO60543 219 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 IFNA17P01571 189 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 HBG1P69891 147 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 HBG2P69892 147 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 S1PR3Q99500 378 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 RPRMQ9NS64 109 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 FAM90A26D6RGX4 464 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 TMEM178BH3BS89 294 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 RAB29O14966 203 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms