RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MKRN2OSH3BPM6 223 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 PROP1O75360 226 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 DEFA4P12838 97 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 ZNF134P52741 427 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 HBG1P69891 147 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 HBG2P69892 147 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 CCL8P80075 99 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 PRR30Q53SZ7 412 aaPredicted RBP13.09□□□□□ -0.31
LRFN1-201ENST00000248668 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 ZZEF1O43149 2961 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 NUTF2P61970 127 aaKnown RBP13.09□□□□□ -0.31
LRFN1-201ENST00000248668 NKX6-1P78426 367 aaPredicted RBP13.09□□□□□ -0.31
LRFN1-201ENST00000248668 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 ARFGEF3Q5TH69 2177 aa13.09□□□□□ -0.31
LRFN1-201ENST00000248668 MARCH11A6NNE9 402 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 CCKARP32238 428 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 TLE4Q04727 773 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 EIF4EBP1Q13541 118 aaPredicted RBP13.08□□□□□ -0.32
LRFN1-201ENST00000248668 MSMO1Q15800 293 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 FAM57AQ8TBR7 257 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 A8MXE2 369 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 CXCL1P09341 107 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
LRFN1-201ENST00000248668 MZT1Q08AG7 82 aa13.08□□□□□ -0.32
LRFN1-201ENST00000248668 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.08□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BKO60814 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 IFNA10P01566 189 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BJP06899 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 NPSP0C0P6 89 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TUBG1P23258 451 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BOP23527 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BBP33778 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BDP58876 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BCP62807 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 ZNF726P1Q15940 193 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST2H2BEQ16778 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BHQ93079 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 CCL13Q99616 98 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BNQ99877 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HIST1H2BMQ99879 126 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 PPP1R14DQ9NXH3 145 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 CLDN14O95500 239 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 GYPAP02724 150 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 CD40P25942 277 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TIMP3P35625 211 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 ICAM4Q14773 271 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 MORN2Q502X0 79 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 DOLPP1Q86YN1 238 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 FAM216BQ8N7L0 139 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 ZBTB34Q8NCN2 500 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 QTRT1Q9BXR0 403 aaKnown RBP13.07□□□□□ -0.32
LRFN1-201ENST00000248668 Q9UFV3 132 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 MGST3O14880 152 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 SCAF4O95104 1147 aaKnown RBP13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TRGC2P03986 189 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 ZNF787Q6DD87 383 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 R3HDM4Q96D70 268 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 SNX22Q96L94 193 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 C2orf88Q9BSF0 95 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TUBA4BQ9H853 241 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 HSPB7Q9UBY9 170 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 TNCP24821 2201 aa13.07□□□□□ -0.32
LRFN1-201ENST00000248668 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 IGHV1-46P01743 117 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 WNT2P09544 360 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 C1orf229Q6ZS94 237 aaPredicted RBP13.06□□□□□ -0.32
LRFN1-201ENST00000248668 SFXN3Q9BWM7 321 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
LRFN1-201ENST00000248668 GCM1Q9NP62 436 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 ZNRD1Q9P1U0 126 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 CACNA1AO00555 2505 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 TGIF2-C20orf24A0A0A6YYL0 155 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 FAM90A1Q86YD7 464 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 RCC1LQ96I51 464 aaKnown RBP13.06□□□□□ -0.32
LRFN1-201ENST00000248668 SPG11Q96JI7 2443 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 SRP19P09132 144 aaKnown RBP13.06□□□□□ -0.32
LRFN1-201ENST00000248668 SELENOVP59797 346 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 TFF3Q07654 80 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 LRRC75BQ2VPJ9 315 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 TAF15Q92804 592 aaKnown RBP eCLIP13.06□□□□□ -0.32
LRFN1-201ENST00000248668 CALYQ9NYX4 217 aa13.06□□□□□ -0.32
LRFN1-201ENST00000248668 ZFYVE26Q68DK2 2539 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 PRRG2O14669 202 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 ADH4P08319 380 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 GZMHP20718 246 aa13.05□□□□□ -0.32
LRFN1-201ENST00000248668 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
LRFN1-201ENST00000248668 DUTP33316 252 aaKnown RBP13.05□□□□□ -0.32
LRFN1-201ENST00000248668 RAB11AP62491 216 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms