RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 ZNRD1Q9P1U0 126 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 FBXL17Q9UF56 701 aa11.54□□□□□ -0.56
SDF2-201ENST00000247020 ARID1AO14497 2285 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 A1L4Q6 167 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 FAM24AA6NFZ4 105 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 TMEM50AO95807 157 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 FGF2P09038 288 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 HTR2BP41595 481 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 SPCS3P61009 180 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 RAB14P61106 215 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 ARF6P62330 175 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 RELBQ01201 579 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 EIF5AL1Q6IS14 154 aaKnown RBP11.53□□□□□ -0.56
SDF2-201ENST00000247020 STX12Q86Y82 276 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 UBAC2Q8NBM4 344 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 OR4P4Q8NGL7 312 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 OR4C13Q8NGP0 309 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 RBKSQ9H477 322 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 WASHC3Q9Y3C0 194 aa11.53□□□□□ -0.56
SDF2-201ENST00000247020 BORCS7-ASMTA0A0B4J1R7 106 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 IGSF23A1L1A6 192 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 ODF3BA8MYP8 253 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 RBMXL2O75526 392 aaKnown RBP11.52□□□□□ -0.57
SDF2-201ENST00000247020 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.57
SDF2-201ENST00000247020 SULT1A1P50225 295 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 OR4A47Q6IF82 309 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 OR8H3Q8N146 312 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 STPG2Q8N412 459 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 OR4A5Q8NH83 315 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 VSTM2AQ8TAG5 236 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 LHX4Q969G2 390 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 FLYWCH2Q96CP2 140 aaKnown RBP11.52□□□□□ -0.57
SDF2-201ENST00000247020 SLC25A32Q9H2D1 315 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 PSENENQ9NZ42 101 aa11.52□□□□□ -0.57
SDF2-201ENST00000247020 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
SDF2-201ENST00000247020 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 LY6LH3BQJ8 138 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 SHOXO15266 292 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 NXPH3O95157 252 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 CEACAM3P40198 252 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 ZNF266Q14584 549 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 ALKAL2Q6UX46 152 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 PUSL1Q8N0Z8 303 aaKnown RBP11.51□□□□□ -0.57
SDF2-201ENST00000247020 PNKDQ8N490 385 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 TMEM14BQ9NUH8 114 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 FKBP11Q9NYL4 201 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 PRNDQ9UKY0 176 aa11.51□□□□□ -0.57
SDF2-201ENST00000247020 RPS10-NUDT3A0A1W2PQS6 291 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 LEUTXA8MZ59 168 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 OOSP1A8MZH6 123 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 H7C2Y5 167 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 COX7A1P24310 79 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 HTR1DP28221 377 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 LGALS7P47929 136 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 NHLH2Q02577 135 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 RPEQ96AT9 228 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 HARBI1Q96MB7 349 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 ARV1Q9H2C2 271 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 ZNF257Q9Y2Q1 563 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 INSIG2Q9Y5U4 225 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 IGHV1-3A0A0C4DH29 117 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 UPK2O00526 184 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 DFFBO76075 338 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 ARG1P05089 322 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 IAPPP10997 89 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 SLC25A16P16260 332 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 REG1BP48304 166 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 HBG1P69891 147 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 HBG2P69892 147 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 RPP30P78346 268 aaKnown RBP11.5□□□□□ -0.57
SDF2-201ENST00000247020 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 MINOS1Q5TGZ0 78 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
SDF2-201ENST00000247020 HCP5Q6MZN7 132 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 TMEM14EPQ6UXP3 125 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 OR1S2Q8NGQ3 325 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 RNF5Q99942 180 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
SDF2-201ENST00000247020 SIRT7Q9NRC8 400 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 DPM3Q9P2X0 92 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 MINOS1-NBL1R4GNA1 71 aa11.5□□□□□ -0.57
SDF2-201ENST00000247020 TET2Q6N021 2002 aaPredicted RBP11.49□□□□□ -0.57
SDF2-201ENST00000247020 LINC00862A6NCI5 91 aa11.49□□□□□ -0.57
SDF2-201ENST00000247020 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
SDF2-201ENST00000247020 IFNA17P01571 189 aa11.49□□□□□ -0.57
SDF2-201ENST00000247020 USF1P22415 310 aaPredicted RBP11.49□□□□□ -0.57
SDF2-201ENST00000247020 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
SDF2-201ENST00000247020 LCN2P80188 198 aa11.49□□□□□ -0.57
SDF2-201ENST00000247020 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms