RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 MIXL1Q9H2W2 232 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 RPS11P62280 158 aaKnown RBP eCLIP6.28□□□□□ -1.4
SSR1-201ENST00000244763 ZNF826PQ6ZT77 177 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 C2orf88Q9BSF0 95 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 TMEM74BQ9NUR3 256 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 HEATR1Q9H583 2144 aaKnown RBP6.28□□□□□ -1.4
SSR1-201ENST00000244763 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
SSR1-201ENST00000244763 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 FUT9Q9Y231 359 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 TRAV39A0A0B4J263 110 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 LOC389332A0A1B0GUA5 103 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 RND2P52198 227 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 ZNF502Q8TBZ5 544 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 WNT5BQ9H1J7 359 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 SCN8AQ9UQD0 1980 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 BRCA1P38398 1863 aaKnown RBP6.28□□□□□ -1.4
SSR1-201ENST00000244763 PRSS2P07478 247 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 FOXB2Q5VYV0 432 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 ZNF880Q6PDB4 577 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 FAM216AQ8WUB2 273 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 ABHD17AQ96GS6 310 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 GPR82Q96P67 336 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 PRSS22Q9GZN4 317 aa6.28□□□□□ -1.4
SSR1-201ENST00000244763 ZNF703Q9H7S9 590 aaPredicted RBP6.28□□□□□ -1.4
SSR1-201ENST00000244763 CA7P43166 264 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 UNC119Q13432 240 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 RNASEH2CQ8TDP1 164 aaKnown RBP6.27□□□□□ -1.41
SSR1-201ENST00000244763 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 PNKDQ8N490 385 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 AQP3Q92482 292 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 ALKBH7Q9BT30 221 aaPredicted RBP6.27□□□□□ -1.41
SSR1-201ENST00000244763 KLHDC2Q9Y2U9 406 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 SBF2Q86WG5 1849 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 RPL29P47914 159 aaKnown RBP6.27□□□□□ -1.41
SSR1-201ENST00000244763 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
SSR1-201ENST00000244763 TBX15Q96SF7 602 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 ABCA7Q8IZY2 2146 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 OR5P3Q8WZ94 311 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 IL36RNQ9UBH0 155 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 SLC16A13Q7RTY0 426 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 Q96M66 194 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 E9PLN8 166 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 PRSS8Q16651 343 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 VKORC1Q9BQB6 163 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 METRNQ9UJH8 293 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 ZNF236Q9UL36 1845 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 WDR90Q96KV7 1748 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 MEF2BQ02080 365 aaPredicted RBP6.27□□□□□ -1.41
SSR1-201ENST00000244763 CBLN4Q9NTU7 201 aa6.27□□□□□ -1.41
SSR1-201ENST00000244763 C7orf66A4D0T2 115 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 C17orf100A8MU93 164 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 HLA-DQB1P01920 261 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 SCGB1A1P11684 91 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 CXCL3P19876 107 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 SELENOHQ8IZQ5 122 aaKnown RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 PRELID3AQ96N28 172 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 RBM38Q9H0Z9 239 aaKnown RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 POC1AQ8NBT0 407 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 TP53RKQ96S44 253 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 NRTNQ99748 197 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 FOXJ2Q9P0K8 574 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 IL17BQ9UHF5 180 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 WNK3Q9BYP7 1800 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 TMEM262E9PQX1 116 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 H3BVH4 76 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 GREM1O60565 184 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 PAX1P15863 534 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 TMEM190Q8WZ59 177 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 TCF19Q9Y242 345 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 AHCTF1Q8WYP5 2266 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 PDCD11Q14690 1871 aaKnown RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 IGKV3D-15A0A087WSY6 115 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 TRBV5-7A0A0A0MS05 114 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 CENPVL1A0A0U1RR11 272 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 IGKV3-15P01624 115 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 GPX4P36969 197 aaPredicted RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 DTX2Q86UW9 622 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 OR11H7Q8NGC8 314 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 NDUFB4O95168 129 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 EFNB2P52799 333 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 TMEM177Q53S58 311 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 REC114Q7Z4M0 266 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 EFEMP2O95967 443 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 ZNF56Q15929 161 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 LINC01560Q8TB33 94 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 DYRK2Q92630 601 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 SOSTQ9BQB4 213 aa6.26□□□□□ -1.41
SSR1-201ENST00000244763 MED19A0JLT2 244 aaPredicted RBP6.26□□□□□ -1.41
SSR1-201ENST00000244763 NTN1O95631 604 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms