RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 LINC01551Q86U37 167 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 RPP25LQ8N5L8 163 aaKnown RBP8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 ABHD3Q8WU67 409 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 PAXXQ9BUH6 204 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 TCFL5Q9UL49 500 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 CD55P08174 381 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 DMWDQ09019 674 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 RNPS1Q15287 305 aaKnown RBP8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 Q6ZS52 159 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 NEU1Q99519 415 aa8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 SSBP3Q9BWW4 388 aaPredicted RBP8.12□□□□□ -1.11
NUDCD1-201ENST00000239690 J3QR06 171 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 CNIH1O95406 144 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 OR2H2O95918 312 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 PLAURQ03405 335 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 NMSQ5H8A3 153 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 RNF144BQ7Z419 303 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 GATAD1Q8WUU5 269 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 RALYQ9UKM9 306 aaKnown RBP8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 SCGB1C2P0DMR2 95 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 OCC1Q8TAD7 63 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 hCG_38984A0A1B0GV85 526 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 CTSSP25774 331 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 SPEM2Q0P670 501 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 IL15RAQ13261 267 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 ACSF3Q4G176 576 aaPredicted RBP8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 OR10J3Q5JRS4 329 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 NUDT10Q8NFP7 164 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 OR4F17Q8NGA8 305 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 OR1L1Q8NH94 360 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 FLVCR1-AS1Q8TAF5 88 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 LRRC29Q8WV35 223 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 PRDM14Q9GZV8 571 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 MEGF9Q9H1U4 602 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 AAMDCQ9H7C9 122 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 CHODLQ9H9P2 273 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 AMMECR1Q9Y4X0 333 aaPredicted RBP8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 FANCMQ8IYD8 2048 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 STAG3L2P0CL84 134 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 TFF2Q03403 129 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 VMA21Q3ZAQ7 101 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 C9orf50Q5SZB4 431 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 SAMD13Q5VXD3 122 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 SLC22A18ASQ8N1D0 253 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 LYZL4Q96KX0 146 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 PKIBQ9C010 78 aa8.11□□□□□ -1.11
NUDCD1-201ENST00000239690 GCSHP23434 173 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TIMP3P35625 211 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 CA7P43166 264 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TCTAP57738 103 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 MTURNQ8N3F0 131 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 STPG3Q8N7X2 389 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TMEM178AQ8NBL3 297 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 ZDHHC16Q969W1 377 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 SFXN3Q9BWM7 321 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 CXXC4Q9H2H0 198 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 ELOVL5Q9NYP7 299 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 ANAPC10Q9UM13 185 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 DENND4AQ7Z401 1863 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TRPM7Q96QT4 1865 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TRAV30A0A087WSZ9 112 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 GNB1P62873 340 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 GNB2P62879 340 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 UNQ6494/PRO21346Q6UXR6 183 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 OR1B1Q8NGR6 318 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 TMEM54Q969K7 222 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 PERPQ96FX8 193 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 GUCD1Q96NT3 240 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 DEFB127Q9H1M4 99 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 GNB4Q9HAV0 340 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 EPHA8P29322 1005 aaPredicted RBP8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 ARF6P62330 175 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 CCL7P80098 99 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 OR2Z1Q8NG97 314 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 OR10AG1Q8NH19 301 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 ZNF355PQ9NSJ1 428 aa8.1□□□□□ -1.11
NUDCD1-201ENST00000239690 IGKV3D-11A0A0A0MRZ8 115 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 VEGFBP49765 207 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 HGFACQ04756 655 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 Q5PR19 223 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 HES3Q5TGS1 186 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 TUSC5Q8IXB3 177 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 ABHD12Q8N2K0 398 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 C5orf17Q8NAS9 161 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 FLYWCH2Q96CP2 140 aaKnown RBP8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 NABP2Q9BQ15 211 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 IGHV4-34P06331 123 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 PRRX1P54821 245 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 UCP2P55851 309 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 ZNF501Q96CX3 271 aaPredicted RBP8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 EAF1Q96JC9 268 aaPredicted RBP8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 C19orf24Q9BVV8 132 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 TCF19Q9Y242 345 aa8.09□□□□□ -1.11
NUDCD1-201ENST00000239690 A1L4Q6 167 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms