RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 EXPH5Q8NEV8 1989 aa11.94□□□□□ -0.5
PCDHB3-201ENST00000231130 IGLV3-12A0A075B6K2 115 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 SAP30O75446 220 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 LRFN3Q9BTN0 628 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 GNB4Q9HAV0 340 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 TOX4O94842 621 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 IGLV3-19P01714 112 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 GPX1P07203 203 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 EDDM3BP56851 147 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 RAC3P60763 192 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 LTC4SQ16873 150 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 FGFRL1Q8N441 504 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 PRRG4Q9BZD6 226 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 ARL2-SNX15V9GYD0 113 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 DEGS1O15121 323 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 RAMP3O60896 148 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 TOMM40O96008 361 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 C3orf79P0CE67 100 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 CA6P23280 308 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 MRPL49Q13405 166 aaKnown RBP11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
PCDHB3-201ENST00000231130 MRPL33O75394 65 aaKnown RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 NUDT3O95989 172 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 SMIM12Q96EX1 92 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 PROK2Q9HC23 129 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 RBFOX2O43251 390 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 SMPD2O60906 423 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 LHX2P50458 406 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 GFRA1P56159 465 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 LINC00310P59036 64 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 ZNF324BQ6AW86 544 aaPredicted RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 CPT1CQ8TCG5 803 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 IGHV5-10-1A0A0J9YXX1 117 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 GNG7O60262 68 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 ZG16O60844 167 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 CTXN2P0C2S0 81 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 MGST1P10620 155 aaKnown RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 GDF1P27539 372 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 PCBD1P61457 104 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 WDR74Q6RFH5 385 aaPredicted RBP11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 ABHD14BQ96IU4 210 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 IL36GQ9NZH8 169 aa11.92□□□□□ -0.5
PCDHB3-201ENST00000231130 ASPMQ8IZT6 3477 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 TRAV24A0A0B4J272 114 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 H0Y8G0 127 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 TFF1P04155 84 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 P04436 131 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 NPPCP23582 126 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 PCOLCEQ15113 449 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 SH3BGRL2Q9UJC5 107 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 HEATR1Q9H583 2144 aaKnown RBP11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 WNT2P09544 360 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 CD46P15529 392 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 OR8I2Q8N0Y5 310 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 OR52L2PQ8NGH6 319 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 DLL3Q9NYJ7 618 aa11.91□□□□□ -0.5
PCDHB3-201ENST00000231130 IGHV3-13P01766 116 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 COX5AP20674 150 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 FKBP2P26885 142 aaKnown RBP11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 IFI44Q8TCB0 444 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 SERTAD4Q9NUC0 356 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 VENTXO95231 258 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 CCL4P13236 92 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 GNB1P62873 340 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 CXorf67Q86X51 503 aaPredicted RBP11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 RNF138Q8WVD3 245 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.5
PCDHB3-201ENST00000231130 DEFB108AA8MXU0 73 aa11.9□□□□□ -0.51
PCDHB3-201ENST00000231130 OR10P1Q8NGE3 313 aa11.9□□□□□ -0.51
PCDHB3-201ENST00000231130 OR2Y1Q8NGV0 311 aa11.9□□□□□ -0.51
PCDHB3-201ENST00000231130 OR1L1Q8NH94 360 aa11.9□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF716A6NP11 495 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 SRIP30626 198 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 Q6ZSR3 168 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 RCHY1Q96PM5 261 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 NCOR1O75376 2440 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 IGHV3-43A0A0B4J1X8 118 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF503-AS2A6NEH8 195 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 J3QW42 95 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 HSBP1O75506 76 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 IGHV3-43DP0DP04 118 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 RAC2P15153 192 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 DRAM1Q8N682 238 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 SVIPQ8NHG7 77 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 RFESDQ8TAC1 157 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms