RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 TMEM268Q5VZI3 342 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
SEC61B-201ENST00000223641 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 NPBQ8NG41 125 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
SEC61B-201ENST00000223641 AIFM2Q9BRQ8 373 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
SEC61B-201ENST00000223641 MAST4O15021 2626 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 A6NDX4 124 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 MARCH11A6NNE9 402 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 SHOXO15266 292 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 NDUFA3O95167 84 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 CRYGBP07316 175 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 SRD5A1P18405 259 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 VDAC1P21796 283 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 RPS16P62249 146 aaKnown RBP11.22□□□□□ -0.61
SEC61B-201ENST00000223641 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 PUSL1Q8N0Z8 303 aaKnown RBP11.22□□□□□ -0.61
SEC61B-201ENST00000223641 SLC35G3Q8N808 338 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 OR8H1Q8NGG4 311 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 R3HDM4Q96D70 268 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 RHOVQ96L33 236 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 HARBI1Q96MB7 349 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 TCF19Q9Y242 345 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
SEC61B-201ENST00000223641 CUBNO60494 3623 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 H3BUX3 64 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 ATG12O94817 140 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 SPDEFO95238 335 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 KRASP01116 189 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 IGHV4-59P01825 116 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 CNTFRP26992 372 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 G6PCP35575 357 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 F2RL1P55085 397 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 UBE2KP61086 200 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 C2orf68Q2NKX9 166 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 LIN54Q6MZP7 749 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 FAM219AQ8IW50 185 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 RBM14Q96PK6 669 aaKnown RBP11.21□□□□□ -0.61
SEC61B-201ENST00000223641 TSNAXQ99598 290 aaKnown RBP11.21□□□□□ -0.61
SEC61B-201ENST00000223641 RAB18Q9NP72 206 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 BET1LQ9NYM9 111 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 MMP24Q9Y5R2 645 aa11.21□□□□□ -0.61
SEC61B-201ENST00000223641 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 CRLF1O75462 422 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 ADAP1O75689 374 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 OR2F2O95006 317 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 FGF2P09038 288 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM11P17152 192 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 HES1Q14469 280 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 PSG5Q15238 335 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 OR4A47Q6IF82 309 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 VKORC1L1Q8N0U8 176 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 FAM71E2Q8N5Q1 922 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 SIGLECL1Q8N7X8 197 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 TEX45Q8NA69 505 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 ZDHHC16Q969W1 377 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
SEC61B-201ENST00000223641 A0A1B0GVG6 124 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 RRHO14718 337 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 NBR2O15453 112 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
SEC61B-201ENST00000223641 OR2A4O95047 310 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 HOXB5P09067 269 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 FAM157CP0CG43 387 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 SAA1P0DJI8 122 aaPredicted RBP11.19□□□□□ -0.62
SEC61B-201ENST00000223641 SULT1A3P0DMM9 295 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 SULT1A4P0DMN0 295 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 SLC25A6P12236 298 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 AKR1C2P52895 323 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 RRAS2P62070 204 aaPredicted RBP11.19□□□□□ -0.62
SEC61B-201ENST00000223641 HNF4GQ14541 408 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 GGNBP1Q5YKI7 109 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 Q6ZRM9 215 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 C16orf82Q7Z2V1 217 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 Q8N9W7 124 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 DMBX1Q8NFW5 382 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 VSTM2AQ8TAG5 236 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM167AQ8TBQ9 72 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 GPR146Q96CH1 333 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 RRNAD1Q96FB5 475 aaKnown RBP11.19□□□□□ -0.62
SEC61B-201ENST00000223641 OR2A7Q96R45 310 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM140Q9NV12 185 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 SIGLEC9Q9Y336 463 aa11.19□□□□□ -0.62
SEC61B-201ENST00000223641 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
SEC61B-201ENST00000223641 MTORP42345 2549 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 MPTX1A8MV57 137 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 UPK2O00526 184 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 FGF16O43320 207 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 SSNA1O43805 119 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 SLC25A17O43808 307 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms