RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TAS2R31P59538 309 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 MMDQ15546 238 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 ZNF585BQ52M93 769 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 TMEM177Q53S58 311 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 TMEM128Q5BJH2 165 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 SLC25A42Q86VD7 318 aa13.07□□□□□ -0.32
LIM2-201ENST00000221973 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
LIM2-201ENST00000221973 S1PR2O95136 353 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 SERPINE2P07093 398 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 VSIG10L2P0DP72 767 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 VAMP1P23763 118 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 SUPT4H1P63272 117 aaKnown RBP13.06□□□□□ -0.32
LIM2-201ENST00000221973 PPP1R1AQ13522 171 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 PLET1Q6UQ28 207 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 TCTEX1D1Q8N7M0 179 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 OSR1Q8TAX0 266 aaPredicted RBP13.06□□□□□ -0.32
LIM2-201ENST00000221973 TSNAXQ99598 290 aaKnown RBP13.06□□□□□ -0.32
LIM2-201ENST00000221973 RNF5Q99942 180 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 PLSCR3Q9NRY6 295 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 PRR13Q9NZ81 148 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 KCNIP3Q9Y2W7 256 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
LIM2-201ENST00000221973 SRRM4A7MD48 611 aaKnown RBP13.05□□□□□ -0.32
LIM2-201ENST00000221973 NBR2O15453 112 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 PTTG1O95997 202 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 HPRT1P00492 218 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 OR4E1P0C645 316 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 RPA2P15927 270 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 DHODHQ02127 395 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 PSG5Q15238 335 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 RGS21Q2M5E4 152 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 TRIM16LQ309B1 348 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 C4orf46Q504U0 113 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 PLEKHA2Q9HB19 425 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 FAM212BQ9NTI7 297 aaPredicted RBP13.05□□□□□ -0.32
LIM2-201ENST00000221973 C1RLQ9NZP8 487 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 KIAA1456Q9P272 454 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
LIM2-201ENST00000221973 PRKDCP78527 4128 aaKnown RBP13.04□□□□□ -0.32
LIM2-201ENST00000221973 B3GALNT1O75752 331 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 IGLV2-23P01705 113 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 UCP1P25874 307 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 LGALS7P47929 136 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 RELBQ01201 579 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 SSX9Q7RTT3 188 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 C16orf82Q7Z2V1 217 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 Q8N9W7 124 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 NPBQ8NG41 125 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 OR8H1Q8NGG4 311 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 CASTOR1Q8WTX7 329 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 GLYATL2Q8WU03 294 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 GALNT14Q96FL9 552 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 TMEM222Q9H0R3 208 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 FBXL15Q9H469 300 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 RAB18Q9NP72 206 aa13.04□□□□□ -0.32
LIM2-201ENST00000221973 NOTCH1P46531 2555 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 C9orf170A2RU37 121 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 FAM181BA6NEQ2 426 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 SH2D7A6NKC9 451 aaPredicted RBP13.03□□□□□ -0.32
LIM2-201ENST00000221973 RRHO14718 337 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 SLC25A17O43808 307 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 SFT2D2O95562 160 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 HRASP01112 189 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 IGKV1-39P01597 117 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 IGKV1D-39P04432 117 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 ANXA3P12429 323 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 UBE2MP61081 183 aaKnown RBP13.03□□□□□ -0.32
LIM2-201ENST00000221973 SRSF4Q08170 494 aaKnown RBP13.03□□□□□ -0.32
LIM2-201ENST00000221973 TMEM187Q14656 261 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 PLGLAQ15195 96 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 C5orf56Q8N8D9 126 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 DMBX1Q8NFW5 382 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 R3HDM4Q96D70 268 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 RHOVQ96L33 236 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
LIM2-201ENST00000221973 COMMD9Q9P000 198 aa13.03□□□□□ -0.32
LIM2-201ENST00000221973 METTL1Q9UBP6 276 aaKnown RBP13.03□□□□□ -0.32
LIM2-201ENST00000221973 WNK1Q9H4A3 2382 aa13.02□□□□□ -0.32
LIM2-201ENST00000221973 INMT-MINDY4F8WBC2 141 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 NDUFA3O95167 84 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 SPDEFO95238 335 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 KRASP01116 189 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 HLA-AP01891 365 aaKnown RBP13.02□□□□□ -0.33
LIM2-201ENST00000221973 AMY1AP04745 511 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.33
LIM2-201ENST00000221973 NQO2P16083 231 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 G6PCP35575 357 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 MECP2P51608 486 aaKnown RBP13.02□□□□□ -0.33
LIM2-201ENST00000221973 UBE2KP61086 200 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 ERVK-16P61578 105 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 DHRS2Q13268 280 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 C5orf64Q2M2E5 130 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 VMA21Q3ZAQ7 101 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 TMEM268Q5VZI3 342 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
LIM2-201ENST00000221973 ZNF695Q8IW36 515 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms