RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 TMPRSS3P57727 454 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 CD81P60033 236 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 HOXA4Q00056 320 aaPredicted RBP17.43■□□□□ 0.38
CCDC130-201ENST00000221554 LTC4SQ16873 150 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 RAB1CQ92928 201 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 SDSLQ96GA7 329 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 SMIM7Q9BQ49 75 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 TRBV24-1A0A075B6N3 115 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 PROP1O75360 226 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 CXCL1P09341 107 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 EDDM3BP56851 147 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 FOXC1Q12948 553 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 MSMPQ1L6U9 139 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 FAM210BQ96KR6 192 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 IFI27L2Q9H2X8 130 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 KCNIP2Q9NS61 270 aa17.43■□□□□ 0.38
CCDC130-201ENST00000221554 TRGV8A0A0C4DH27 118 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 SEC14L6B5MCN3 397 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 SPRY3O43610 288 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 THBS3P49746 956 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 ITLN1Q8WWA0 313 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 RAB24Q969Q5 203 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 SLC25A22Q9H936 323 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 GFOD1Q9NXC2 390 aa17.42■□□□□ 0.38
CCDC130-201ENST00000221554 TRGV10A0A0A0MS01 117 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 KBTBD11-OT1A0A1B0GTJ5 212 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 IFNA10P01566 189 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 CDC34P49427 236 aaPredicted RBP17.41■□□□□ 0.38
CCDC130-201ENST00000221554 TFF3Q07654 80 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 ZNF343Q6P1L6 599 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 ZNRF1Q8ND25 227 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 TXNDC17Q9BRA2 123 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 HEYLQ9NQ87 328 aaPredicted RBP17.41■□□□□ 0.38
CCDC130-201ENST00000221554 URGCP-MRPS24S4R325 110 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 CFAP47Q6ZTR5 3102 aa17.41■□□□□ 0.38
CCDC130-201ENST00000221554 LAMA5O15230 3695 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 IGHV3OR15-7A0A075B7D8 119 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 TGIF2-C20orf24A0A0A6YYL0 155 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 CDX1P47902 265 aaPredicted RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 SSX8Q7RTT4 187 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 FAM57AQ8TBR7 257 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 Q8TCH9 128 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 DDB2Q92466 427 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 CHD3Q12873 2000 aaKnown RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 ANKRD11Q6UB99 2663 aaPredicted RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 TPRP12270 2363 aaKnown RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 VENTXO95231 258 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 OPRK1P41145 380 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 VDAC2P45880 294 aaPredicted RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 TNFAIP6P98066 277 aaPredicted RBP17.4■□□□□ 0.38
CCDC130-201ENST00000221554 RELBQ01201 579 aa17.4■□□□□ 0.38
CCDC130-201ENST00000221554 GTF3C1Q12789 2109 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 BSXQ3C1V8 233 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 NUP37Q8NFH4 326 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 CORO2AQ92828 525 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 ANAPC16Q96DE5 110 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 NEIL1Q96FI4 390 aaPredicted RBP17.39■□□□□ 0.37
CCDC130-201ENST00000221554 LINC00574Q9H8X3 128 aa17.39■□□□□ 0.37
CCDC130-201ENST00000221554 ELOA3CA0A087WX78 387 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-201ENST00000221554 ZNF729A6NN14 1252 aaPredicted RBP17.38■□□□□ 0.37
CCDC130-201ENST00000221554 PDE6DO43924 150 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 LINC00205P59089 165 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 C17orf58Q2M2W7 97 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 SCNM1Q9BWG6 230 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 TMEM140Q9NV12 185 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 A0A1W2PPV4 95 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 A8MXE2 369 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 HRASP01112 189 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 IRF2P14316 349 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 S100PP25815 95 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 ZNF134P52741 427 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 RPL39P5Q59GN2 51 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 STUMQ69YW2 141 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 ALKBH2Q6NS38 261 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 VHLLQ6RSH7 139 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 OR4F5Q8NH21 305 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 OR4F4Q96R69 305 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 GCM1Q9NP62 436 aa17.38■□□□□ 0.37
CCDC130-201ENST00000221554 INTS1Q8N201 2190 aaKnown RBP17.37■□□□□ 0.37
CCDC130-201ENST00000221554 ADIRFQ15847 76 aa17.37■□□□□ 0.37
CCDC130-201ENST00000221554 POU2AF1Q16633 256 aa17.37■□□□□ 0.37
CCDC130-201ENST00000221554 RBMXL3Q8N7X1 1067 aaKnown RBP17.37■□□□□ 0.37
CCDC130-201ENST00000221554 NANPQ8TBE9 248 aa17.37■□□□□ 0.37
CCDC130-201ENST00000221554 DOK5Q9P104 306 aa17.37■□□□□ 0.37
CCDC130-201ENST00000221554 FOXA2Q9Y261 457 aaPredicted RBP17.37■□□□□ 0.37
CCDC130-201ENST00000221554 CLN5O75503 358 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 IGHV1-46P01743 117 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 NDUFA6P56556 154 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 TLE1Q04724 770 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 SPINK9Q5DT21 86 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 SSX9Q7RTT3 188 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 OR5B12Q96R08 314 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 PARLQ9H300 379 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 ENY2Q9NPA8 101 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 ELOVL5Q9NYP7 299 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 IDI2-AS1Q9NZ38 188 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 TCF19Q9Y242 345 aa17.36■□□□□ 0.37
CCDC130-201ENST00000221554 HEATR1Q9H583 2144 aaKnown RBP17.36■□□□□ 0.37
CCDC130-201ENST00000221554 C15orf61A6NNL5 157 aa17.35■□□□□ 0.37
CCDC130-201ENST00000221554 FNDC10F2Z333 226 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms