RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SEC11BP0C7V7 166 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS18-201ENST00000220509 TMEM267Q0VDI3 215 aaPredicted RBP9.02□□□□□ -0.97
VPS18-201ENST00000220509 ZNF154Q13106 437 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 ELOBQ15370 118 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 PRSS50Q9UI38 385 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 ATP23Q9Y6H3 246 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 YLPM1P49750 1951 aaKnown RBP9.02□□□□□ -0.97
VPS18-201ENST00000220509 BOD1L1Q8NFC6 3051 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 ACTL6BO94805 426 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 TOMM40O96008 361 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 KRASP01116 189 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 FAM87AP0C7U9 286 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 PPP1CBP62140 327 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 ZNF665Q9H7R5 613 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 UBTD1Q9HAC8 227 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 FUT9Q9Y231 359 aa9.02□□□□□ -0.97
VPS18-201ENST00000220509 TMEM14DPA8MWL7 114 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 SPRY3O43610 288 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 SCGB1A1P11684 91 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 HBG1P69891 147 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 HBG2P69892 147 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 OR10S1Q8NGN2 331 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 NKX2-6A6NCS4 301 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 ADAM20O43506 726 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 NGFP01138 241 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 ESDP10768 282 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 CD33P20138 364 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 GPR12P47775 334 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 DYNLT3P51808 116 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 AMMECR1LQ6DCA0 310 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 DNM1P46Q6ZS02 220 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 MDP1Q86V88 176 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 OR10V1Q8NGI7 309 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 VN1R17PQ8TDU5 208 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 TRBV6-7A0A0A0MS04 114 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 DEFB108AA8MXU0 73 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 PPYP01298 95 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 OTX1P32242 354 aaPredicted RBP9.01□□□□□ -0.97
VPS18-201ENST00000220509 ZNF816Q0VGE8 651 aaPredicted RBP9.01□□□□□ -0.97
VPS18-201ENST00000220509 IZUMO4Q1ZYL8 232 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 H1FXQ92522 213 aaKnown RBP9.01□□□□□ -0.97
VPS18-201ENST00000220509 C10orf35Q96D05 121 aa9.01□□□□□ -0.97
VPS18-201ENST00000220509 HEYLQ9NQ87 328 aaPredicted RBP9.01□□□□□ -0.97
VPS18-201ENST00000220509 TMEM131Q92545 1883 aa9□□□□□ -0.97
VPS18-201ENST00000220509 C3orf85A0A1B0GTC6 90 aa9□□□□□ -0.97
VPS18-201ENST00000220509 PRRG2O14669 202 aa9□□□□□ -0.97
VPS18-201ENST00000220509 GAPDHP04406 335 aaKnown RBP9□□□□□ -0.97
VPS18-201ENST00000220509 CXorf66Q5JRM2 361 aaPredicted RBP9□□□□□ -0.97
VPS18-201ENST00000220509 DPPA3Q6W0C5 159 aa9□□□□□ -0.97
VPS18-201ENST00000220509 FADS6Q8N9I5 356 aa9□□□□□ -0.97
VPS18-201ENST00000220509 H0Y980 276 aa9□□□□□ -0.97
VPS18-201ENST00000220509 TNFSF13O75888 250 aa9□□□□□ -0.97
VPS18-201ENST00000220509 CSRP1P21291 193 aaKnown RBP9□□□□□ -0.97
VPS18-201ENST00000220509 C19orf35Q6ZS72 473 aa9□□□□□ -0.97
VPS18-201ENST00000220509 LRFN3Q9BTN0 628 aa9□□□□□ -0.97
VPS18-201ENST00000220509 VAX2Q9UIW0 290 aa9□□□□□ -0.97
VPS18-201ENST00000220509 LOC400499M0QZD8 3231 aa9□□□□□ -0.97
VPS18-201ENST00000220509 TLN1Q9Y490 2541 aaKnown RBP9□□□□□ -0.97
VPS18-201ENST00000220509 IGFBP3P17936 291 aaPredicted RBP9□□□□□ -0.97
VPS18-201ENST00000220509 NPBWR2P48146 333 aa9□□□□□ -0.97
VPS18-201ENST00000220509 FOXC1Q12948 553 aa9□□□□□ -0.97
VPS18-201ENST00000220509 PDLIM3Q53GG5 364 aaPredicted RBP9□□□□□ -0.97
VPS18-201ENST00000220509 H2BFWTQ7Z2G1 175 aa9□□□□□ -0.97
VPS18-201ENST00000220509 BTF3L4Q96K17 158 aa9□□□□□ -0.97
VPS18-201ENST00000220509 AP1S3Q96PC3 154 aa9□□□□□ -0.97
VPS18-201ENST00000220509 RSG1Q9BU20 258 aa9□□□□□ -0.97
VPS18-201ENST00000220509 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
VPS18-201ENST00000220509 FREM1Q5H8C1 2179 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 IGHV3-43A0A0B4J1X8 118 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 IFNL4K9M1U5 179 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 IGHV3-43DP0DP04 118 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 TMPRSS3P57727 454 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 ZFP36L1Q07352 338 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 VAX1Q5SQQ9 334 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 GALMQ96C23 342 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 ZNF71Q9NQZ8 489 aaPredicted RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 SLC39A9Q9NUM3 307 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 RALYQ9UKM9 306 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 WNK2Q9Y3S1 2297 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 ANKRD11Q6UB99 2663 aaPredicted RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 LOC102723996A0A087X1L8 192 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 B5MCH6 92 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 GFRA1P56159 465 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 WDR82Q6UXN9 313 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 GAPTQ8N292 157 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 DEPPQ9NTK1 212 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 TUBD1Q9UJT1 453 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 HEATR1Q9H583 2144 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 OR5B21A6NL26 309 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 FTH1P19P0C7X4 201 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 ACP1P24666 158 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 MFAP4P55083 255 aa8.99□□□□□ -0.97
VPS18-201ENST00000220509 SUMO1P63165 101 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 SRSF4Q08170 494 aaKnown RBP8.99□□□□□ -0.97
VPS18-201ENST00000220509 RTP5Q14D33 572 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms