RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 VSIG10L2P0DP72 767 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 P2RY4P51582 365 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 TBX15Q96SF7 602 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 TM4SF5O14894 197 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 RAMP1O60894 148 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 ATP5IP56385 69 aaPredicted RBP16.13■□□□□ 0.17
SMPD3-201ENST00000219334 SPACA3Q8IXA5 215 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 OR51M1Q9H341 326 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 PPP1R3EQ9H7J1 279 aa16.13■□□□□ 0.17
SMPD3-201ENST00000219334 NRN1LQ496H8 165 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 RTN4RL2Q86UN3 420 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 VKORC1L1Q8N0U8 176 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 OR5AC2Q9NZP5 309 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 INTS1Q8N201 2190 aaKnown RBP16.12■□□□□ 0.17
SMPD3-201ENST00000219334 IL4P05112 153 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 CD99P14209 185 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 LINC01590Q5TEZ4 76 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 NPIPB3Q92617 1050 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 GPHA2Q96T91 129 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 COL4A1P02462 1669 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 EFEMP2O95967 443 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 CDKN1AP38936 164 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 DRAM1Q8N682 238 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 SPTBN2O15020 2390 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 CEP250Q9BV73 2442 aa16.12■□□□□ 0.17
SMPD3-201ENST00000219334 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
SMPD3-201ENST00000219334 HKR1P10072 659 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 HIST1H1AQ02539 215 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-201ENST00000219334 C9orf106Q8NAJ2 232 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 WDYHV1Q96HA8 205 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 A0A0G2JMM0 328 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 A0A1W2PPB8 328 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 A0A1W2PRS3 328 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 KIR3DP1A8MWS1 328 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 LY6DQ14210 128 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 ZFP30Q9Y2G7 519 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 MRPS18CQ9Y3D5 142 aaKnown RBP16.11■□□□□ 0.17
SMPD3-201ENST00000219334 CBY3A6NI87 242 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 IGKV3-20P01619 116 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 C2orf83Q53S99 150 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 C19orf24Q9BVV8 132 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 IGHV1-2P23083 117 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 PEAR1Q5VY43 1037 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-201ENST00000219334 FAM159AQ6UWV7 190 aa16.11■□□□□ 0.17
SMPD3-201ENST00000219334 RGP1Q92546 391 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-201ENST00000219334 FAM216BQ8N7L0 139 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 PRO1933Q9H354 126 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 DLEC1Q9Y238 1755 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 C17orf100A8MU93 164 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 ZNF207O43670 478 aaKnown RBP16.1■□□□□ 0.17
SMPD3-201ENST00000219334 UMODP07911 640 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 CD81P60033 236 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 OSR1Q8TAX0 266 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-201ENST00000219334 IGKV1D-33P01593 117 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 IGKV1-33P01594 117 aa16.1■□□□□ 0.17
SMPD3-201ENST00000219334 C7orf66A4D0T2 115 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 OR4C46A6NHA9 309 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 IFITM10A6NMD0 228 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 MEF2BQ02080 365 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-201ENST00000219334 FBXL15Q9H469 300 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 SULT1A2P50226 295 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 FAM201AQ5SY85 155 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 ZNF818PQ6ZRF7 136 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 IGHV3OR16-13A0A075B7E8 117 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 IGHV3-74A0A0B4J1X5 117 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 TRGC1P0CF51 173 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 CYB561D1Q8N8Q1 229 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 MT-ND6P03923 174 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 MEF2CQ06413 473 aaPredicted RBP16.09■□□□□ 0.17
SMPD3-201ENST00000219334 RPL39P5Q59GN2 51 aa16.09■□□□□ 0.17
SMPD3-201ENST00000219334 PIN1P1O15428 100 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 ZXDCQ2QGD7 858 aaPredicted RBP16.08■□□□□ 0.17
SMPD3-201ENST00000219334 SLC25A38Q96DW6 304 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 CBLN4Q9NTU7 201 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 MIA3Q5JRA6 1907 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 TMEM177Q53S58 311 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 FAM74A4Q5TZK3 123 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 LHFPL5Q8TAF8 219 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 GPR82Q96P67 336 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 NPFFR1Q9GZQ6 430 aa16.08■□□□□ 0.17
SMPD3-201ENST00000219334 TMEM14DPA8MWL7 114 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 UCP3P55916 312 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 DLX6P56179 175 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 C11orf91Q3C1V1 193 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 PPP1R27Q86WC6 154 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 FBXL7Q9UJT9 491 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 LY75O60449 1722 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 STAG3L2P0CL84 134 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 ZNF56Q15929 161 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 PRSS8Q16651 343 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 IGHV3-48P01763 117 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 POC1AQ8NBT0 407 aa16.08■□□□□ 0.16
SMPD3-201ENST00000219334 MRPL32Q9BYC8 188 aaKnown RBP16.08■□□□□ 0.16
SMPD3-201ENST00000219334 E9PLN8 166 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 GCGP01275 180 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 NCMAPQ5T1S8 102 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 VKORC1Q9BQB6 163 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 ATAD5Q96QE3 1844 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 A6NDN8 102 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms