RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 METRNQ9UJH8 293 aa18.41■□□□□ 0.54
HTATSF1-201ENST00000218364 TFF1P04155 84 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 SNRPCP09234 159 aaKnown RBP18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 CD46P15529 392 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 TMPRSS3P57727 454 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 SPCS3P61009 180 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 RNFT1Q5M7Z0 435 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 ZNF114Q8NC26 417 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 SFRP2Q96HF1 295 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 FREM2Q5SZK8 3169 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 OR4A8P0C604 315 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 DUTP33316 252 aaKnown RBP18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 TMEM164Q5U3C3 297 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 TRAT1Q6PIZ9 186 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 OR52E5Q8NH55 327 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 ELOVL5Q9NYP7 299 aa18.4■□□□□ 0.54
HTATSF1-201ENST00000218364 PRSS46E5RG02 174 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 PROP1O75360 226 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 HPRT1P00492 218 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 STAG3L2P0CL84 134 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 STAG3L3P0CL85 134 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 LPAL2Q16609 132 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 PDLIM3Q53GG5 364 aaPredicted RBP18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 TREML4Q6UXN2 200 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 TPRX1Q8N7U7 411 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 AURKAIP1Q9NWT8 199 aaPredicted RBP18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 LYZL6O75951 148 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 SOX8P57073 446 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 RFESDQ8TAC1 157 aa18.39■□□□□ 0.53
HTATSF1-201ENST00000218364 DEFB108AA8MXU0 73 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 RBFOX2O43251 390 aaKnown RBP eCLIP18.38■□□□□ 0.531e-8■■■■■ 28.2
HTATSF1-201ENST00000218364 SPINT2O43291 252 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 VDAC2P45880 294 aaPredicted RBP18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 PRAMEF6Q5VXH4 476 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 TRBV20OR9-2A0A075B6H5 130 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 YPEL3P61236 119 aaPredicted RBP18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 ZDHHC11Q9H8X9 412 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 PATZ1Q9HBE1 687 aaKnown RBP18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 IL17BQ9UHF5 180 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 DNAJC13O75165 2243 aa18.38■□□□□ 0.53
HTATSF1-201ENST00000218364 SELLP14151 372 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 BMP5P22003 454 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 RAB4BP61018 213 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 SMIM21Q3B7S5 101 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 SGMS2Q8NHU3 365 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 FAM216AQ8WUB2 273 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 FER1L6-AS2Q96M78 137 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 DOCK7Q96N67 2140 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 FKBP11Q9NYL4 201 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 MGST2Q99735 147 aa18.37■□□□□ 0.53
HTATSF1-201ENST00000218364 MDFIC2A0A1B0GVS7 189 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 PGPEP1LA6NFU8 196 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 CXorf1O96002 111 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 ARL14EPLP0DKL9 152 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 GGTLC1Q9BX51 225 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 RRHO14718 337 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 FCGR3BO75015 233 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 IGKV3-15P01624 115 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 KITLGP21583 273 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 GPR12P47775 334 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 USF2Q15853 346 aaPredicted RBP18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 PRAMEF5Q5TYX0 476 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 Q6ZT83 130 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 TMEM256Q8N2U0 113 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 OR4A16Q8NH70 328 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 Q8TCH9 128 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 MS4A5Q9H3V2 200 aa18.36■□□□□ 0.53
HTATSF1-201ENST00000218364 USF3Q68DE3 2245 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 CD177Q8N6Q3 437 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 DCTN5Q9BTE1 182 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 TUBG2Q9NRH3 451 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 GFRA3O60609 400 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 GCH1P30793 250 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 C1orf194Q5T5A4 169 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 TEX38Q6PEX7 206 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 CLCF1Q9UBD9 225 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 PTPRBP23467 1997 aa18.35■□□□□ 0.53
HTATSF1-201ENST00000218364 TIMP3P35625 211 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 ZNF718Q3SXZ3 478 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 FAM90A1Q86YD7 464 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 HEYLQ9NQ87 328 aaPredicted RBP18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 GTF3C1Q12789 2109 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 NUPR1O60356 82 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 ERVFC1-1P60608 527 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 NUTF2P61970 127 aaKnown RBP18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 RELBQ01201 579 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 MIC13Q5XKP0 118 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 TGIF2LXQ8IUE1 241 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 WFIKKN1Q96NZ8 548 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 JPT1Q9UK76 154 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 FRYLO94915 3013 aa18.34■□□□□ 0.53
HTATSF1-201ENST00000218364 TRAV9-1A0A075B6T8 112 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 EREGO14944 169 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 TIMM8AO60220 97 aaPredicted RBP18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 SELENOTP62341 195 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 MORN2Q502X0 79 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 FAM214BQ7L5A3 538 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 OCC1Q8TAD7 63 aa18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 LSM4Q9Y4Z0 139 aaKnown RBP18.33■□□□□ 0.53
HTATSF1-201ENST00000218364 KIR2DL5BA0A0G2JN68 375 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms